Microarray Probes on PGSC0003DMT400012847
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_39309_PI426222305 |
JHI_St_60k_v1 |
AGGCCCATTAAAACCGAGCCCACTGGCCCATACTTCATGGTTTGACAATTTTGCGTATAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400012847
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400012847 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G63410.1 |
+3 |
1e-21 |
91 |
57/143 (40%) |
Protein of unknown function (DUF567) | chr1:23510075-23511997 REVERSE LENGTH=208 |
Transcript Sequence (835 bp)
>PGSC0003DMT400012847 835 pgsc_dm_v3.4
AAGAAAGAAATAGTAATGAAGTTTTCCTCATGGATCTTAGTGGACAAGTTCTCTTCTTTA
TTAAAAAAGAGAGACTAAGATTACTTGGTAGGTGGAGTGGATATTTAAGTGGTGGATTTA
AAGGAAAGCCATGGTTTCAAGTGAGAAGAAATTGGAAGTATTCAAAAGGAGATGTTATTT
GTGATGTAAATTTAGGGTGTGATAAATCTATAGGAAGTTGCTATAAGATTCAACAAATCG
ACAAAAAATCATCATTTCAAATCTCAAATAATACTGGTCAACTTGTCGCAAAGGTAAATC
AAAAGCAATCATCAAGAGGATTTGGGTATGGTGATGATGTGCTAACTCTAGAAGTGGAAC
CTCAAGTTGATTACTCATTTATTGTGGCTCTTGTGACAATATGTGGTTTGATTAAACACA
AATTATAAAGAGCACAATTAGTCTAAAATTGACTATTGCAAGATATAATCCTGAAAATTC
AAAATTCATGGTCTCCTCAACATACATGAACCATGAAATTTCAAGCTGGCGCGAATGCTA
TCGAATGGAAAATTTTCATTTTTCAGTTCAAAATCCGATTTGAGGAAAAAAAAAAGTTCT
AGGTCAAGGTAGTAGCACGTATGGTACAACATCAGTCCCTTGATCTCAGTGCAATGTATG
AGACTTAGTCAAGAGATCGATCTGAAGATACCGATAAAAAAAAAGGAAAGAAGGTAGATA
TTACTTTGATTCATGTTGAGCTTCATGTTCATTTTGGGCCTTCTGTTGACTCAAGGCCCA
TTAAAACCGAGCCCACTGGCCCATACTTCATGGTTTGACAATTTTGCGTATATGC
