Microarray Probes on PGSC0003DMT400012487
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_33931_PI426222305 |
JHI_St_60k_v1 |
CCAATCCATCACCCTAAGTGTTGATTTACGATCCCGGAAAGAGTTTAATTAATGTAAAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400012487
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400012487 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G21330.1 |
+2 |
2e-49 |
176 |
133/283 (47%) |
basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr3:7507720-7508841 FORWARD LENGTH=373 |
Transcript Sequence (1531 bp)
>PGSC0003DMT400012487 1531 pgsc_dm_v3.4
ACTTTAGCTTCTTCTATATATAAGCATGTTTCCCAACCAACATATTGCAGCTTAAGTCAG
AACATCTCCTTCAGCAACAACTAGGCAATTCTTATACATCTCTGCTTCATTTTTCATCCT
CTGCAGCTAGTTTTTCACTTATCAGATTCTGTGCACTTGGCCAAGCTTAATGTTGTCCAA
TTCATACCGTTTTGCCCCTTTCAGTAGCAAAGCTAATCCTTTAATTTCAATTCAGCAGCA
AGTTGATATCGGCGCATCGTCAGCCATGAATTTTCAGGAATTTGGAGCTGCATTTGATCC
AATCGATATCCTTTCTAGCTGGAATATCTCTCAGCGTCAAGAAGCTGCGACGAGATTGGC
TGCAGACTCTGTCGCTGCTAAATCAGGAGCAGGTTCAATTGGGGATTGTACTAATAGTAA
AATTGGTTCATCTTCTTCTTTTCCTCCGCGGAACAATTATTTGCCTTACTTGGGTAATAA
TCAAGTTCCTATTTGTGGCTTAATGGCGGATGTTAGTTCAATTGGCCTATTCTCAAAAAA
CAGATCCCCTGATTGCTTGCTTTCTGCAACCAATACAAGCAACACCAACACATCGGGCGA
ATTAGATGATGTGATTTTCTCTGATGATTCTGAAAGCTTGTGGAATATCCACACTAACAA
TGCAGTTTCATCCGGAGAATCTGCAATTGATGCCTACAAATCAAAACCCATTGATGCCAA
TGACAACAATAATATTCACTACTCTGTTAATGAGCTTGATGAAACAGTCTCGTGTAACAA
TTTTATAACATCTTCAGAAGGAAATCGTTACAATATGGACAAGAGAAGCCACAATGCTCT
GCTCGAATCAGATTCCTCGAACAGAGACTACGTATTCCAGCTCATTTCGGAAAATGATCA
ACCTAAGTCCAAGAAATCCAGATCAGAATACAAGCTTCCAAGTTCATCGAACATCAATTT
CCAGCAAGCTAGTTCTTCGGCTTGTTCAATAGTTGATCCTGATTCAGAAGCAATTGCACA
AATGAAGGAAATGATTTATCGCGCAGCAGCATTCAGGCCAGTGAGCTCTGTCAGGGAAGA
TGTGATGGCAGAGAAGCCGAAGAGGAAGAACGTAAGAATATCAATGGATCCACAAACAGC
TACAGCGAGACGAAGGAGGGAAAAGATAAGCGAAAGAATAAGGATATTGCAGAAGCTGGT
ACCAGGAGGAAGCAATATGGACACTGCATCCATGCTTGATGAGGCTGCAAACTATCTCAA
GTTCTTAAGGACACAAGTGAATGCCTTGGGAGCATTTGGCTTTAATATAGACCCAAGTAT
CATTAACAATAACTTTACTACTTCTTTATCTTCAATACCATTAATCAACTACCCATTTCC
CTTGCAACCACATTTTCCTATGCAAAACCTCAATCCAATCCATCACCCTAAGTGTTGATT
TACGATCCCGGAAAGAGTTTAATTAATGTAAAAATAAAAACATATTATCAGGTCAAATAT
ACATGTTACAACAGGTAACATGATTTATTAT
