Microarray Probes on PGSC0003DMT400012257
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_30167_PI426222305 |
JHI_St_60k_v1 |
GGGTGTTGAATGGGTCGGGTTGGGTTAAGGATATTTTGAAAATAAAAGTGTTTGATTTAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400012257
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400012257 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G16563.1 |
+3 |
0.0 |
558 |
301/505 (60%) |
Eukaryotic aspartyl protease family protein | chr4:9329933-9331432 REVERSE LENGTH=499 |
Transcript Sequence (1985 bp)
>PGSC0003DMT400012257 1985 pgsc_dm_v3.4
AAAAGATTACTATTTCTCATAAACCCTCCCCTAAATCCTCACCAAACCAGTAGCAGCAGC
AGCTTCGTCCTCTTCTCCTCTGCCACCTCCTTTATAAACCTCTGTTTTCTTCCACTCTTT
TATATACAACAAACAAAGCAAAATCTCTCTTCTCTCTCTCTCTCTATCTGTGAGTCTGTG
TACATAAAAGATAAGGTTCAGTACAGTTTTCAGCTGTTAATTTATTCATTTGAAACAATA
CTCTGTTTTCTGCAAAACCTCTGTTTTCACCAACAATGGCTTCTTCTTGCTCTGTTTTCT
TCACTATTTTGGTTTTCATCTCTCTGTTCCTTTTCTATTCTGCTTCTGGAACGTTGGTTT
TCCCTTTAAAGCATTCTTTTTCAAGAACCCAATTCAACAGTACTCATCATCTTCTCAAAT
CCACCACCGTTCGCTCCGCTTCTCGCCTCCACCACCACCGTCATCCCCACCGTCAAGTTT
CTCTTCCTCTAACTCCGGGAAGTGATTACACTCTCTCCTTTTCACTTGGGTCACAGACTA
TTTCTCTCTACATGGATACTGGTAGCGACGTCGTTTGGCTCCCCTGTCATCCATTTGATT
GTATTCTCTGTGAAGGGAAGTATAATCCTACCTCTATCCCTAACCCTGGCCCTATTAACC
TCACCTCCGCCGTCCCTGTCTCGTGCAAGTCACGTGCTTGCTCCGCCGTTCACTCTTCGT
TACCGTCCTCCGACCTCTGTACTATTGCGAAATGCCCACTTGAAGATATTGAAATTTCAG
ATTGCAAGTCGTATTCGTGTCCCCCTTTTTACTATGCTTATGGTGATGGAAGTTTCATCG
CCAAGCTTTACAGCGATGAATTATCAATACCCATGTCATCTCCGTCGTTGATTTTGCAGA
ATTTTACATTTGGGTGTGCTCATAGTGCTCTCGGTGAACCAATCGGAGTAGCTGGGTTTG
GCCGGGGAACTCTTTCGTTGCCGGCGCAACTCGCGAATAACTCACCGGAAATCGGAAATT
ACTTCTCTTATTGTTTAGTTTCTCACTCTTTTGACACCAATCAAGTTAATCGACCGAGTC
CGCTCATTCTCGGTCGATACTCAGTCGATGAAAAAATGAAACAGATGAAGAATTATTATT
CCGATTACGCTTACACCCCAATGCTCGAAAACCCAAAACACCCATATTTCTACAGCGTCG
GACTCGAAGGTGTATCTATCGGAAAAACAAAGATTCCGGCGCCGGCGAGCTTACGTCGAG
TTGACAGAAGAGGAAACGGCGGAATGGTGGTGGATTCCGGTACGACTTTTACTATGTTAC
CTTTGAAGTTCTATGAAACAGTGGTGACTGAATTCGTCCGGAGAGTTGGACCGGTTCTTA
AAAGAGCAAACCCGGTTGAAGAAAAAACCGGGCTTCGCCCGTGTTACTATATGGACTCCG
GTTCAAAAAATGTGCCGCAGCTGTTATTACATTTTGGGGGAAATTCCAGTGTGGTGATGC
CTAGGAGAAACTATTTTTATGAGTTCGTTGATGAGAAAGTGAAAAGGAAAGTAGGATGTG
TGATGTTGATGAACGGTGGTGATGAAGGGGAAAGTGGGCCCGCAGGGATATTAGGAAATT
ATTTTCAACAAGGATTTGAAGTTGTTTATGATTTAGAAAAGAAAAGAGTTGGATTTGCAA
AAAGGAAGTGCGCATCTTTGTGGGATAACTTGAATCAACACTAACGTGCGCGGTTGCGTA
GCAGATTAAATTTGACGTTGACTTTGAATTCTATAGTCAAGTCAAGTAGGGTCGGGGTGT
TGAATGGGTCGGGTTGGGTTAAGGATATTTTGAAAATAAAAGTGTTTGATTTATTTTTTT
CTATTTCTGTATGTTATTGTATAGCTGAAGTTTTGGTACATATTAGACAAAAATAATGAA
AAATAGAAAGGAGGAGAAAATAATAAAATGTGGATGTAACTTTTTGGCAATTGGATTTGT
TAATT
