Microarray Probes on PGSC0003DMT400012159
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_30228_PI426222305 |
JHI_St_60k_v1 |
AAACTCTTGCGTGAAAGCTGGACCATCAGTTAGAGGAGCGGCATGGGGAAAACTTAATTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400012159
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400012159 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G13200.1 |
+2 |
2e-112 |
333 |
147/231 (64%) |
GRAM domain family protein | chr5:4207081-4208079 FORWARD LENGTH=272 |
Transcript Sequence (1192 bp)
>PGSC0003DMT400012159 1192 pgsc_dm_v3.4
CCAGAGAGAAAGCCCAAAATTTTCTAGTGTAATCTTACTGACAAAGCGAAAATAAAAAAT
GAAAACGCGTACACGTTCTACATAATCATCGTCTATAAATTATTATAATTCCATAACTAT
ATGTCCATCTAAGACAAATTCCACTCAAAATTCAATTACTCAAGCAATTTCTTCAATCAT
GACAGGCACAGGAGAGGAAAATCAGCCCAAATTTCAACAATCAGAGCCTCAGATACCTTC
TGTTTCTTCATCTTCTTCAGATCCTCAAGCACCAGAAATGGATCAGCAAAAATGGGGAAC
TCATATTATGGGTCCGCCTGCAATTCCAACTTCTCATCCAGACAATCAGAAAGCCGCCTT
ATGGAGAGCTGAGGACCAAAGAGAAGAGTTTCAGCCACTGCCTTACGTTGTTTATTCCCC
AATTGACAAATCTAGCAATAACCCACTTGAATCGGTTGTTAATGTGTTCAATTCGTGGAG
TAATAGAGCTGAGAACATCGGCCGCAACATTTGGTATAATCTGAAAGCTGGACCATCAGT
TAGAGGAGCGGCATGGGGAAAACTTAATTTGACAGCCAAGGCGTTGACAGAGGGTGGATT
TGAGCCTCTTTACAAACAGATTTTCGAAGCAGATCCTAATGAACAGCTGAAAAAGACATT
TGCTTGTTGTCTTTCCACTGCAACTGGTCCTGTTGCTGGTACACTCTATCTGTCAACTAC
GAAAGTTGCTTTTTGCAGTGATCGCCCATTATCATTCAAAGCTCCATCTGGTCAGGAGGC
CTGGAGCTACTACAAGGTAGCAATACCTTTGGGAAATATTGGGACTATAAATCCAATAGT
GATGAGAGAGTCTCCACCAGAGATGTACATTCAGATTGTTACCATCGATGGTCATGATTT
CTGGTTCATGGGGTTTGTGAATTTTGAGAAAGCAAAACGTCATCTACTTGACACTTTGTC
AATTTTTAGAGCTCAACCTCCTCATGTTGGAGAAGTCAATGTGCCACAACCAGCTACTTA
CTAGAAGAAATTGCCTGTCATAGCTTATTGGGCTACACTCTGTTTTAGTTTGTTTTTCTT
TTTCAGTTTGTTCCTGCATTAGATATATCTTTGTATTTTTTTATTGTAACATTACTTGTA
TGTTTATACTTATTTGGGAGTGACTTGGTTGTTTTGATGAGAAACTCTTGCG
