Microarray Probes on PGSC0003DMT400011901
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_20748_PI426222305 |
JHI_St_60k_v1 |
GCAGCTATCTTCTAAAGGATCAACTCATGATGAAATTGACTTTGAGTTCTTAGGAAATGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400011901
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400011901 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G14130.1 |
+3 |
1e-105 |
313 |
148/195 (76%) |
xyloglucan endotransglucosylase/hydrolase 15 | chr4:8137161-8138196 REVERSE LENGTH=289 |
Transcript Sequence (856 bp)
>PGSC0003DMT400011901 856 pgsc_dm_v3.4
TAATTATAGATGACGATTGTTACAAAGACAGCAAAAGAACAATTTTCTAACATTTTATTT
GGATTATTTTGCAGCTATCTTCTAAAGGATCAACTCATGATGAAATTGACTTTGAGTTCT
TAGGAAATGTTAGTGGTGAACCATTTATTCTTCATACAAATGTCTTTAGCCAAGGCAAAG
GAGACAAAGAGCAACAATTTTACCTATGGTTTGATCCTACCAAGAACTTCCACACCTACT
CAATCATATGGAAACCACAACACATCATTTTCTTGGTGGACAACACTCCAATTAGAGTAT
TCAAGAATGCAGAATCACTTGGTGTTCCATTTCCCAAGAACCAACCAATGAAAATTTACT
CAAGTCTATGGAATGCTGATGATTGGGCTACAAGAGGAGGACTAGTGAAAACTGATTGGT
CAAAAGCACCATTCACAGCCTATTATAGAAATTTCCATGCACAAAAGTTTAACAAATCTC
AGTTTTTAGATGCAAAATGGCAAAATCAAGAACTTGATGCTAATGGAAGAAGAAGACTTA
GATGGGTTCAAAGGAATTATATGATTTATAATTATTGCACTGATTACAAAAGATTTCCTC
AAGGTTTTCCTCTAGAATGTAGAAAATTTTGAGTTTGTATGGTTACGTTGCTCGGTCTCT
CCAAAAATGTTGTCGCGCCTATGTCAGATCCTATCTGACATGTGATTGATGGCTTTTTTT
TGAAGAGTTCGAGCAACATAGGTTGTATGTTGAATATGTTATGATTGTAGTTCTGACTTG
TAATATGACAATATCTTATGCCTACCAAAAGTTTATTAAATTCGAAATTCTAATAAGAGG
GAAATTCAGGATTTGA
