Microarray Probes on PGSC0003DMT400011708
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_20757_PI426222305 |
JHI_St_60k_v1 |
CTGATTCAACTATGGATGCTGCTAAGAATGCTAAAGATAAGATTACTGATACTGCTTCAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400011708
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400011708 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G36600.1 |
+3 |
2e-06 |
49 |
26/77 (34%) |
Late embryogenesis abundant (LEA) protein | chr4:17263666-17264968 FORWARD LENGTH=353 |
Transcript Sequence (1176 bp)
>PGSC0003DMT400011708 1176 pgsc_dm_v3.4
ACAAGTTACATTGAGTTAGTTTTATTGTGTAACAAAATATTATGGCCTCAAAAAAGTTGA
TTTGTGTGTTGTTGCTTGTGGTGTTGTGTTTGTCTAATTTTGGGAGTTGTAAAGAAATCC
ATGATGATGAAGTTGTTGAGCAACAAATTAGTAAAGAAAATGAAAATTTAGAGTCATCAT
CATGGGCAGGATGGGCTAAAGATAAGATTTCTGAAGGACTTGGTTTAAAATCTAATGATA
ATGATGATTCAAGTGTTAAACATGCTTCTGATTCAACTATGGATGCTGCTAAGAATGCTA
AAGATAAGATTACTGATACTGCTTCAGGAACCGGACAATACGTAGCAGACAAGGCAGGAA
ATCTAAAGAACGCCGCGGAAGAAGTGAAAAACAGAGCATACCAAACTGCCGAAGAAGCGA
AAAACAAAGCATACGAAACAGCGGAAACAGCAAAAGAAAAAGCAGCAGAGAAATCAGAGG
AAGCCTACTCAAAAGCAGGGGAAGCAAAAGAAAAAGCCTACTCAGAAGCCGAGAAGGCGA
AACACAAAGCAGGGGAAGCAAAAGAAAAAGCTTGTTCAGACGCTGAAAAGGCGAAACACA
CTACCTCCGAGAAAGCACAAGAAGCTTTCCACAAAACAGGGGAAGCAAAGGAAAAAGCCG
CGGAGAAAACAGAGGAAGCGATGGGGAAAATGAAGGAAACGGGCGAAAAAGCTGAGGGGG
AGACGGAGGAACATATAAATTGGGCGAAAGAAGGATACGGAAGCGCGAAAAACAAAGCGG
GAGAGACATTGGAGAAAGCTAAAGAAAGTGTAGCTTCAAATTTGGAATCAGCTAAGGAGA
AAGTAAAAGGGAAAAAAAGAGATGAAGAGTTGTAAGTAAAAGCTTAAGTTGTACGGACAC
TTTACTTTCAATGTCGTGTGGGGTCGGGTACACGCATCTTTCGATGATACGGGTTTGACA
TGCATCTTTCGATGATATTCTTGAAGAGTCTTGAGCGAAGTGCAAGTTGCTACATGTTTC
TCTTTTGGAGGTTTATATATATGTAATAAGTAAACAGAAAGCTGATGTTTTTTGTTTTGT
TTTGTGTTTGGTAAAAATGTATTACTGGACTTCTCTTTTATGACAAATGATGTTTGGTCT
TTAGTTTTACCTGTGTCTTTGGTTGTTAAAACTAAG
