Microarray Probes on PGSC0003DMT400011693
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_20670_PI426222305 |
JHI_St_60k_v1 |
TTATAATTGCTTCAGCTCTTTTTCAACCTCTTGGTTTTGGTACTACTGGTGGTAAACAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400011693
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400011693 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G16920.1 |
+3 |
2e-165 |
476 |
225/321 (70%) |
chitinase-like protein 2 | chr3:5776663-5777886 REVERSE LENGTH=348 |
Transcript Sequence (1482 bp)
>PGSC0003DMT400011693 1482 pgsc_dm_v3.4
GTCTCTTTCACTTCCAAAGAAAAAAAAAACTTCACCAAAAACCCAAGAAAATATATAAAA
AGAGCAAAAGTTCCAATTTTGATTCATACCCAAATCTCAAAAACCACTAATTCATCTTCC
CAATTCACTAATTTCTCCATTTTTTCAGTTTTCAAATTTCAAAATTTTCATTTTGAGTGA
TAAAAATGGCAACTTTAAAGATGAAAATTTTGGGATTTATGGTAATAATGCTTTCAATTT
CTGCAATTGCAAAAGGGGATGAAAATGAAAATGAATCATCATCTAAGCCACCAACATTGG
TGAAAATGGTAAAGGGTAAAAAAATGTGTGTTAAAGATTGGGAATGTAATGTGTTGTCAA
GATTTTGTTGTAATTTGACAATTTCTGATTTTTTTGAGACTTATCAATTTGAGAATTTGT
TTTCAAAGAGGAATTCACCTGTAGCTCATGCTGTTGGTTTTTGGGATTATAAATCTTTTA
TAATTGCTTCAGCTCTTTTTCAACCTCTTGGTTTTGGTACTACTGGTGGTAAACAAATGC
AGATGAAAGAAATTGCTGCTTTTCTTGGCCATGTTGGTAGCAAAACTTCTTGTGGTTATG
GAGTCGCCACCGGTGGACCATTGGCTTGGGGTCTTTGCTATAACAAGGAAATGAGTCCTA
GCCAAGATTACTGTGATGACTTCTTCAAATTAACTTACCCGTGCTCTCCCGGAGTCCAAT
ATTATGGCCGTGGTGCCTTGCCTATCTACTGGAACTACAACTACGGAAAAATAGGCGAAG
CACTGAAGGTAGATTTGTTGAATCATCCCGAATACATTGAACAAAACGCGACCTTGGCAT
TCCAAGCTGCAATTTGGCAGTGGATGAACCCAGTCAAAAAGGGACAGCCTTCAGCTCATG
ATGCCTTCGTTGGCAACTGGAAGCCAACGAAGAATGATACTTTGTCTAAACGAGTTCCTG
GTTTTGGCACCACCATGAACATCCTCTACGGTGACAATGTCTGTAACCAAGGTGATATTG
ACTCAATGAACAACATCATCTCACACTACTTGTATTACCTCGACTTGATGGGCATTGGTC
GGGAGGAGGCAGGGCCTCACGAACTACTCACCTGCGCGGAACAAAAACCTTTCAATCCAT
CTTCCTCCCCTGCTGCTGCTTCTTCTTGATTAACTCGTATGGGATTCTAGACATCCTAGC
TAGGATTGCTGCTTTTATCCTCGACGTTTTTTCACTAAGAAAACATCCAATAAGTGGAGC
AAGATAGACGTTGTCGTCCTGCTCCCGGTGTAAACTGTGTGTTTGGGTGTTCTATAAATA
AGGATTAAGGATGTGTTGACCCTTTCTTGTTGTGTCTTATTGAAGTTAATCTTGATCAGT
GCAATACATGCAGTGTATGTGAAACTTTAGTCTGTAATAATCTTTTGAACTGTTAAAATT
TGCAAACTTGTTTGTTGTCAGTCAACAACAGAAGAAAATTCC
