Microarray Probes on PGSC0003DMT400011347
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_50893_PI426222305 |
JHI_St_60k_v1 |
CTTGTTCGAGTATGGAAGACAACTTTTACCTTGTGGATCTTTAAAAGCACACAATAGAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400011347
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400011347 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G21160.1 |
+2 |
8e-86 |
266 |
137/229 (60%) |
Translocon-associated protein (TRAP), alpha subunit | chr2:9068428-9070207 FORWARD LENGTH=258 |
Transcript Sequence (1276 bp)
>PGSC0003DMT400011347 1276 pgsc_dm_v3.4
ATTCCTCTGTTTTACCGTCGCCGAAAAACGACAAAACTGCTGGTTTTGCTGGGCTTTTTT
TGTCCCTCTTAGCTCAGCTCTACATTTCTGTTACCTCTCTCCTCTTCATCTTCATCTTCG
ATCTACAATGTCAATTAGGGTTTTCTCTGTTTTCCTCGCTCTCATTCTCTTCTCTTCATC
ATTTCTTCAAGTTGCTAGATGTCAATCCGACCCTGAAACAGATGTGGTAGAAGGCACTGG
AGAAGCAGGAGATCTTGGAATTGTTAATGATGATGTCCAAGATTTTGGCAGTGATAGTTT
TAGTCCCGCACCTGGGATTGAGACGGTTTGTGTTTTCCCCAAAAACCCTTCTAAGGTAGT
GGCAGCTGGTGAGGAAAGTGAGTTGTTAGTTGGAATGAAAAATGATGGGGATTCAAGTTT
GAATATCATTGCAATCCAAGCCAGCGTACACCTTCCTTTTGATCACCGCTATTTGGTTCA
AAATCTGTCTGTACAGGCTTTTAACAATGCTACAGTTCCACCTTCTGCTCAGGCCACTTT
CCCATATATATTTGCTGTCAGCAAATTTATGCAGCCTGGAAGCTTTGATCTTGTCGGTAT
TATTGTTTATGAGATAGACCAGAACCCTTTTCAAAGTACATTCTACAATGGCACTATTGA
AGTGACTGAGCCTGGTGGTCTTCTCAGTGTTGAGTCTGTTTTCTTGTTTTGTCTTGGAAT
TGCCCTCCTTGTTCTTCTTGGATTCTGGATTCGTGGTCAGATACAAAATCTCTCAAAGAA
AACTAAGAGAGCACCAAAGGCAAAGGTTGAAGTTGGAACAGCAACAACAGATGCATCCAC
GGATGAATGGCTTGAGGGAACTGCATATTCTCAATCGCTCTCCAACAAGTCGAAGAAGAA
GAAGTGAATGACTTGAACTTTCTGATACTGAGGCTAGAGATAGACTTGCGAATAGTTGAA
AACATGAAATAGGTTTCCGAAAAGAGAATCCATAGACGTTCTCCACTGTTGTAGCATGAG
GGAAAAACCTATCATCCATGTCTTTTTAGTGCCAACTGACTTGTAGTTGGAGGTGGCAAA
GACAATTTTGTCTTTTAACACATTCTCATTTTTTCCTTTCAAATATTTATTGTTTTTCTG
GGTAGATAGATTTGGCCAGCTAATGGTTCTTGTGGCCTTGTTCGAGTATGGAAGACAACT
TTTACCTTGTGGATCTTTAAAAGCACACAATAGAAATATTATCTGTGATATCGAAACTTA
ATAAAGTAATATGACA
