Microarray Probes on PGSC0003DMT400011236
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_44978_PI426222305 |
JHI_St_60k_v1 |
GCCCTGTTAAGATCCTGCATTTTGTCTTCCATTAGCAGTGTCCATCTTTTCCTTTCTTAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400011236
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400011236 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G10530.1 |
+1 |
4e-129 |
400 |
231/464 (50%) |
Concanavalin A-like lectin protein kinase family protein | chr5:3324978-3326933 REVERSE LENGTH=651 |
Transcript Sequence (2230 bp)
>PGSC0003DMT400011236 2230 pgsc_dm_v3.4
GTTGTTTTTGCCTCTCTCAAATACTTCTTTCTTATCCCTTTAGTCACTTCACTCTCCTTC
AATTTTGATACTTTTACACCCAATGATCACAATGTAACCTATGAGAGAGATGCTTCTCCA
CAAAATGGTGCAATTCTACTCACCACAAACCTCCTCAATCGCAATATCAATGCTAGTATA
GGTCGAGCTATTATTCAAAACCACTCCATCTATGGGACAAGGCCTCTCGAAATCTCACTG
ATTTCACTACACATTTCTCCTTTAGCATTAATTCACAGGGAAGAGCTGAATATGGTGATG
GTTTTGCCTTCTTCCTTGCCCCTGCAGGTTCAACAATTCCTTATAATACAACAAGAGGTG
GAAGCCTTGGCCTTACAAGTAATAATGAGCGACTAAATTCATCCAGTAATCATTTTGTTG
CTGTGGAGTTTGACACCTATCAGAACCTGTATGACCCAAAGGGTGATCATGTAGGTGTCG
ATATCAACTCTATGCAATCTGTTGTTAATGTGACTTGGTTTAGTAGCATTCCAAATGGTA
CGAAAACTGATGCCTGGATTACTTATAATTCTAACTCAAAAAATCTTACTGTTGTCTTCA
CTGGTTTTCAACTCCAGTCTCCAAGGGAATAATATCACAGTCACTGTCCTGCAGAACCTA
TCTTACAATCTTGATCTGAGGGAATATTTACCAGAATGGGTCACTTTTGGCTTCACTGGT
GGAGGAGGAAATAGCTTTGCATTTCAAAGAATCTATTCTTGGAATTTTACTTCTTCTTTA
GATAATATGACAGATACAGGGGTAACCTTATCAAACACCAAGCCAAAGGATGCACCAATA
AAAAGTAAGTTAGGACTTGTGGTTGGATTGATTTCTGGTGGTTGTGTTTTGGTTGCAGTA
TGTGCTTTGGTGTTGTTTGCATTTTGGAGAAAGAGTAAGGTCAGAGAAGATGATCATGTC
TTTGATGGTTCCATGACTAATGAATTTCAAAAAAGTGCAGGACCAAAGAAGTTCTGGTAC
AGTGAGTTGGCTAGATGTACAAATAACTTTTCACAGGAAGAGATGCTTGGGTGGGGGGGA
TTCGGAGGTGTTTATAAAGGATATCTCAGTGAATCCAACTCTTATATTGCTGTTAAGAGG
GTTTCAAGGGAATCACAGCAAGGAATAAAAGAGTATGTATCAGAAGTCAGGATCGTCAGC
AGGTTAAGACATAAACATTTGGTGCAACTCATTGGTTGGTGCCATCAAAAAAGAGAACTT
CTACTTGTCTATGAGTTTATGCCTAATGGGAGCTTAGACCACCATCTTTTCAAGGGAAAA
AGCCATTTGACATGGCCAATAAGATTCAAGATTGCTCAAGGCTTGGCCTCGGCGTTGCTA
TATCTACATGAAGAATGGGAACAATGTGTGGTGCATAGGGATATAAAGTCTAGCAATATT
ATGTTGGATTGTAATTTCAATGCCAAGCTTGGGGATTTTGGGTTAGCTAGGCTAGTTGAC
CATGATAAGGGATCCCAAACAACAGTTTTGGCAGGCACAATGGGTTACATGGCTCCTGAA
TGTGTCACCACTGGCAAAGCTAACAAGGAAACAGACGTCTATAGCTTTGGTATTGTCGTG
TTAGAAATAGGTTGTGGAAGGAAACCTATTGATCCTAAAGCAGAGGAGCATCAAGTAAAC
ATTGTCGATTGGGTTTGGAGACTTTATGGGATGAGAAATATTCTTGAAGCAGTTGATCCG
AAACTATCATCAGAGTTCAATGAAGAGGAGATGGAGCATTTGCTAATTGTTGGCTTATGG
TGTGCTCATCCAGATAGTAATTGCAGGCCTTCTATTAGGCAAGCAGTTCAAGTGCTTAAT
TTTGAAGCTCCATTACCCACACTCCCTCGGAACATGCCTGTGCCCACATATTGCAGCTTC
TCACACCATTTACCAACTATTTCACTTTCATCAACACATGAAACCAACGGTACAGAGATC
GCCCTTGCCCAAATCCAGCATTCAGTAAACGAAAACAACATTGATGCTTCATTAAAAAGA
ACATTTTCTTCAGCATCTTCATCTTCAACATCAGTTTTGTATCCAAGTTAATATTGCCCT
GTTAAGATCCTGCATTTTGTCTTCCATTAGCAGTGTCCATCTTTTCCTTTCTTACTTTTT
GTTGTTTCTCTTCTAATGAAAGAGGATTGAATGGATTACATTTTCTGTAATTTTAACTGT
TCTATCAAAC
