Microarray Probes on PGSC0003DMT400011225
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_44974_PI426222305 |
JHI_St_60k_v1 |
CTGGCAAAGCTAACAAGGAAACCGACGTCTATAGCTTTGGTATTGTCGTGTTAGAAATAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400011225
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400011225 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G10530.1 |
+1 |
4e-134 |
412 |
282/655 (43%) |
Concanavalin A-like lectin protein kinase family protein | chr5:3324978-3326933 REVERSE LENGTH=651 |
Transcript Sequence (1977 bp)
>PGSC0003DMT400011225 1977 pgsc_dm_v3.4
ATGGCTATTTTTGCATCTTTATCTGCTCTCACATACCTTGTTTTGATAATCCCCTTTGTC
ACATCACTGTCCTTCAATTTTGATAGTTTTAATCCCAATGATCAGAATGTAACATATGAG
GCAGATGCTTATCCAGCAAATGGTGTAATTCAGCTCACCAAAAACCAGCGCGATAGTGGT
GCAAACTATAGCATAGGCCGAGCCACATATTCAAAAACACTCCATCTTTGGGACAAGGCC
TCTGGGAATGTCACAGATTTCACTACACACTTCTCCTTTAGCATAAATTCACAGGGCATG
AACATATATGCTGATGGAATTGCCTTTTTCCTCGCCCCTGCAGATTCAAGAATTACTGAT
AACTCAACCGCAGGAGGCGGCCTTGGCCTTGCAAATTATTATAGTCGACAAAATACATCA
AGAAATCAATCTTTTGTTGCTGTCGAGTTTGACACCTTTAAGAACATTGATGATCCACCA
GGTGATCATGTAGGCATCGACATCAACTACATGGTATCTATTGTTAATGTGACCTGGTTT
AGTAATATTCCGAATGGTACGAGAACTGATGCCTGGATTACTTATAATTCAACCTCAAAA
AATCTTAGTGTTGTCTTCACTGGTTTTCAACCACAAGAGAATACCACAGTCACTGTCCTG
CAGACCCTATCTTACAATCTTGATCTGAGGGAATATTTGCCAGAATGGGTCACTTTTGGC
TTCTCAGGTGCAACAGGAACCTACTTTGCAATACAAACCATATATTCTTGGAATTTCACT
TCTTCTTTAAACTATAATGAAAACATAACAGATCCAGATGTACCCCAACCAAGCCCTGTG
CCAGAAGATACTCCAAGCAAAAATAAGTCAGGACTAGTGATTGGATTGATTTCTGGTGGT
TGTGTTTCAGTAGCAGTATCTGTTTTTATATTGTTTGCATTTTGGAGAAAGAGGAAGGTC
AGAGAAGATGAAGATGAAGATATAATTGATGGTTCCATGACTAATGAATTTGAAAGAAAC
ACAGGACCAAAGAAGTTTTTGTATGGTGAGTTGGCTAGATGTACAAATAACTTTTCGCGG
GAAGAGATGCTTGGGCAGGGTGGGTTTGGAGGTGTTTATAAAGGATATCTCAGGGAATAT
GACTCCTATATTGCTGTTAAGAGGATTTCAAGGGAGTCAAAGCAAGGAATAAAAGAGTAT
GCATCAGAAGTCAGGATTATCAGCCGGTTAAGACATAAACATTTGGTGCAACTCGTTGGT
TCGTGCCATCAAAAAAGAGAACTTCTACTTGTCTATGAGTTTATGCCTAATGGAAGCTTA
GACCACCATCTTTTCAAGGGAAAAAGCCATTTGACATGGCCAATAAGATTCAAGATTGCT
CAAGGCTTGGCCTCAGCGTTGTTTTATCTACGCGAAGAATGGGAACAATGTGTGGTGCAT
AGGGACATAAAGTCGAGCAATATTATGTTGGATTCCAATTTCAATGCTAAACTTGGGGAT
TTTGGTTTAGCTAGGCTAGTTGACCATGATAAGGGATCCCAAACAACAGTTTTGGCAGGC
ACAATGGGTTACATGGCTCCTGAATGTGTCACCACTGGCAAAGCTAACAAGGAAACCGAC
GTCTATAGCTTTGGTATTGTCGTGTTAGAAATAGAGTTCAATGAAGAGGAGGTGGAGCAC
TTGCTAATTGTTGGCTTATGGTGTGCTCATCCAGATAACAATTGCAGGCCTTCCATTAGG
CAAGCAATTCAGGTGCTTAATTTTGAAGCTCCATTGCCCACACTCCCTCCAAACATGCCT
GTGCCGACATATTGCAGTTATGGATCAACTACTTCATTTGCATCACCATACGACTCCAAT
GGTCCTGGGATATCTGGAATACAGTCTTCAGGGACTAGAGACTACACTGGTTCTTCAAAT
AACACAGCAGCTTCTGCAGCATCTTCGCCTTCCGCATCACTTCTGTACACACGTTGA
