Microarray Probes on PGSC0003DMT400010881
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_45218_PI426222305 |
JHI_St_60k_v1 |
CGAAATTGCCGATAAATTATGAATTGCTTATTGATAGGGTTTTTGGTGGGGTTGATGATT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400010881
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400010881 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G12710.1 |
+3 |
1e-117 |
352 |
169/269 (63%) |
phloem protein 2-A12 | chr1:4326980-4328324 REVERSE LENGTH=291 |
Transcript Sequence (1544 bp)
>PGSC0003DMT400010881 1544 pgsc_dm_v3.4
TCAAAATTGTCTTCTTCCCTCTCTATATCCTCCATTGATGGTCTCAAATCAAACTATTTT
CTTCTAAAAAATTATCAAATTATCAAATTCTCAAAATGGGTTCTTCTTTATCCCTTTTCT
TGAATCCACGTGGTTCCGTCGCTGTACCGCCGGCGAATCCCGGTTTGGGTGACTTGCCGG
AGAGTTGTGTGGCTTCAGTTATGGTGTATTTGAATCCGTCGGAGATCTGTAGTCTTTCGA
TGCTTAATCGTGGTTTTAGGGCTGCTTCTTCTGCTGATTTTGTATGGGAATCGAAATTGC
CGATAAATTATGAATTGCTTATTGATAGGGTTTTTGGTGGGGTTGATGATTTTTCTAACA
ATTTGTGCAAAAGGGATATTTATGCTAGGCTTTGTCGACCTAGTTATTTTGATGGTGGCT
CAAAGAAGGTTTGGTTAGATAAGGGTACTGGAAGGGTTTGCCTATCAATCTCTGCAAATG
GATTGGCGATAACAGGCATTGACGATAGGAGATATTGGAGTCGTATTAAAACAGACGAAT
CAAGATTCCAGTCCATTGCGTATCTCCAACAGATATGGTGGGTTGAAGTGGGTGGAGAGG
TTGATTTCCCATTCCCAGCAGGGTCCTATAGCATTTTCTACAGGCTGCAAGTAGGACGTT
CCTCTCGGAGATTTGGACGGCGAATTTGCAACTCCGAGCATGTTCACGGATGGGATAAAA
AGCCAGTGCAGTTCCAGCTCTCAACATCTGATGGTCAGCAAGCTACAACCCAGTGTTACA
TGAAAGAACCTGGAAAATGGAAATATCACCATGTAGGAGACTTTACGGTTACAGGGTCTG
CAGCAAATATGAAAGTTAAGTTCTCCATGACCCAAATCGATTGCACCCACACCAAAGGTG
GACTTTGTGTAGATTCTGTGTTAATATGCCCGAGCGAGTTTACAGAGAGGTTAAAGCGTT
TTTAGTTTGCTTGTAGGTCTCTTTAGGAAAGAGTTTATAAAATAGTTAAGAGGTAGCAGT
ATCCATCCATAGTTCTGGAGAAGTTAGTAAGGAACGGCGATCAGATCTATATTAGATCGA
GTCAATGTGTGTGTACGTGTATGGCGGGCTTTTTAAATCCCAACGACACGTGGTAATAGG
TATCATAGGGCTTTATCTTTGAAGTTGACGACACCCCCTTCACGCGAAGTGGTTGTTGTA
CTGAGTTCTTAGTGTATGTTAAATGAAACTACTTTGTTCATGTGTACTTTGAAGTTTGAT
CTTAACAAGCGAATGGAAGCAATATTCTTTGGGTTTGATTGAAATTGGATTCTTTTTCCT
GCATTGAATGATATCCGTGACTTCGTCTTTTGCTTGTAATTGGATTGGAAGCCACTGGCG
ATGCCTTCTTGCCCGTGTAATTGGCCTTGCCTGCTAGGTGCGAAAGTGCGTAAAGTAGGC
TCATTCTTTGGTTTGTAAAGATTTCTTGTAGTTATTGTTACAGAATGACCTCAACATTGT
AAACTCACAAATGCTTCCTCAAATTGTTAAAACTTTCATTGTGC
