Microarray Probes on PGSC0003DMT400010170
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_23386_PI426222305 |
JHI_St_60k_v1 |
CCCATAGAGAGCTGACCACTTTATCATCCATACTTGAGCTAAATAAAATATAGTTCTATC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400010170
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400010170 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G60900.1 |
+2 |
2e-102 |
337 |
201/505 (40%) |
receptor-like protein kinase 1 | chr5:24498467-24501494 REVERSE LENGTH=748 |
Transcript Sequence (2568 bp)
>PGSC0003DMT400010170 2568 pgsc_dm_v3.4
AAAAAAGAGAAGAAAAGCTAAAATCTATGGCTGCTTTGCTATGGTTATTAATATTATCTG
CATTTCATGCAGTAGCACTAGCACAACAAAGGCAGTTCAATATAACTCTTGGCTCTTCTC
TAACACCTACTACCAATTCATCATGGTTTTCGCTGTCCAGGCGCTTTGCCTTTGGGTTTT
ATGAACAAAACAATGGCTATGCTGTTGGAATCTTAATTGTCGGTATGCCTAAGAAGACAG
CAGTGTGGACAGCAAATAGGAACAGTCCTGTTGTTCCGAGCAACGCTGTCTTGCTCTTAA
CTAATGATGGAAGGCTCATTGTACAAGTAGGAGGACAAGAAATCACTGTCGTAAATCTCT
CTGGTCAAGTCATTGCTTCAGCTTCCATGCTGGATACTGGCAACTTTGTGCTCTATAATT
CTGATCACAGTATCATATGGCAAAGTTTTGACAATCCAACAAACACCCTTTTACCTGGTC
AGCATATATCAGCTGGACAAGAGCTGTTCTCGAGTGCCTCGGAAGCAGATGATTCTTTCG
GGATTTTCCGTCTCAAAATGCAAGATGATGGGAACCTCGTTCAGTACCCTGTCAATACAC
CTCATTAGGGATTTTCCGTCTCAAAATGCAAGATGATGGGAACCTCGTTCAGTACCCTGT
CAATACACCAGATAGTGCCTCATATTCTTACTACTCAACAGGCACTTATGGAGCAGGGAA
TAATGTTACACTGAATCTTGATGATGACGGCCTCCTCTACTTACTCAATTCCACTAAAAG
TCTAAGAAATCTAACTCAAGGAGGCAACCGTAGAGAAAGGACCATTATCTATATGCTGAA
AATTGATGCTGATGGTATACTTAGAATTTATTCAAATTCTCTGAACCAACAGAACAGCTC
CGTGATATGGTCATCAACAAATGATAGGTGTAATCCAAAAGGCCTTTGTGGGCTTAATGG
TTTTTGCACCAACATAGATGACCAAGCTAAATGTTTGTGTCTTCCGGGATTTGATTTTGT
AATGCCAGGAAATTGGAGCGCAGGCTGTGAAAGGAATTTCACCGCAGAAACCTGTCGGTT
AAAGGAGAGCACTTCCAAATACTATGCTATGAGAACAGTTGAAAACACAGGATGGGAAGA
TAGTACTTATGTTGTTTTGGCCGGAACGACCAAGGAAGATTGTGAACAAGCCTGTCTACA
GGATTGTAACTGTGAGGCTGCTCTGTTCAAAGACAGAGAGTGTAGAAAGCAAAGGCTGCC
TCTGAGGTATGGAAGGAGAGACTTGGGTAATTCTAATTTAGTATTGGTCAAGGTGGGCAC
TAATTTCATACCCAACGAAGGGGTGCTTTATCAGATGATTGAAGAAACAAAAGGCAAAAA
GCTAAGGATAGACATCCTAATTGCCGGCATTACATTGGCTGTTTTTGCTTTGTTGGTGTT
AGGCATCTCTGGATTCCTCATTCACAGAAATCATGTCTGGACTTACAGAAAAATCCAGGA
GAGTAGAAGTGTTCAGTTATGTGAGGATGTTGCTCCACGAGCATTTTCCTATGCAGAACT
AGAGCAGGCAACAAGTGGTTTCAAAGAAGCGTTAGGGAGGGGAGCATTTGGAACAGTATT
TAAAGGAATTTTGGCAGAAGACCAGAAAGTGATAGCTGTTAAAAGACTAGACAAAGAATT
AGTAGAAGGGGAAACAGAGTTCCAAACTGAAATAAAAATCATTGGAAGGACACATCACCG
AAATCTCGTCCACCTCCTTGGTTATTGCCTGGAGGGATCAAGAAGGCTCCTGGTGTATGA
GTACATGACCAATGGGTCACTTGCGGACATACTTTTCACAACAGAAAAACAGCCCACGTG
GGAGGAAAGGTGTGGCATCACTCGAGATATTGCAAGGGGCCTCCTATATTTGCATGACGA
GTGTGACACACAAATCATCCATTGTGATATAAAGCCTCAGAACATACTCATGGATGATCA
ATACTGTGCAAAAATATCTGACTTTGGAATGGCCAAGCTTTTAAAGAAAGACCAAACAAG
AACCTACACAGGGATAAGAGGGACCAGAGGCTATGTTGCACCAGAATGGCACCGGAAACT
GCCAGTGACAGTGAAAGCAGACGTTTACAGTTTTGGTGTCCTCCTATTGGAATTGATCTG
TAGGCGGAAGTGTGTTGATATGAGCCTTGATGAAAATGAGTCAATTCTTGAATACTGGGT
CTACGATTGCTTTGCTGCAGGAGAGCTAGATAAACTTGTCGGGGACGAGGAGGTTGATAG
AAGACAATTCGAGAGAATGGTGAAAATAAGCATCTGGTGCATTCAAGACGAACCATCACT
TCGCCCTTCAATGAAGAAAGTTCTACTGATGCTGGAAGGGACAGTAGAAATTCCAGTGCC
TCCTAGTCCTACTTCTTTTTTAAGTGCCATATAGTTTTGAACTTCTTCACTTTATGGTTT
TTGTACTTCAAATTTCAAGTATTCCAACTTCCCCATAGAGAGCTGACCACTTTATCATCC
ATACTTGAGCTAAATAAAATATAGTTCTATCAAATTTCTACATCATTC
