Microarray Probes on PGSC0003DMT400010052
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_44354_PI426222305 |
JHI_St_60k_v1 |
GTACCAGCTGTTACTTTGTTTGCTTGTAATAGTGCTTACATTGTAGGATTCGTTTTGTGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400010052
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400010052 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G14067.1 |
+1 |
8e-40 |
149 |
110/260 (42%) |
Subtilase family protein | chr3:4658421-4660754 REVERSE LENGTH=777 |
Transcript Sequence (888 bp)
>PGSC0003DMT400010052 888 pgsc_dm_v3.4
ATGGGATTCTTGAAAATCCTTCTTGTTTTCATCTTTTGTTCTTTCCCATGGCCTACTATT
CAGAGTGATCTCGAGACTTATATAGTCCATGTTGAATCCCCTGAAAGCCTAGTTACTACT
CAATCATCGTTAACGGAATTAGAGAGCTATTACCTTTCTTTTTTGCCTAAAATTACTACC
GCAATTAGCTCGAGTGGAAATGAAGAGGCTGCTAGCATGATCTATTCCTATCACAATGTG
ATGAAAGGCTTTGCAGCAAGATTAACTGCAGAACAAGTGAAGGAAATGGAGAAAAAACAC
GGCTTTGTCTCTGCTCAGAAACAGAGGATTTTGTCCTTGGATACTACTCATACTCCAAGT
TTTCTTGGTTTGCAGCAGAACATGGGTGTATGGAAAGATTCCAACTATGGGAAAGGCGTG
ATCATCGGAGTTCTAGACACTGGAATTATTCCTGACCATCCTTCTTTTAGCGACGTTGGG
ATGCCTCCCCCGCCTGCTAAGTGGAAAGGAGTTTGTGAGTCCAATTTCATCAACAAGTGT
AACAACAAGCTCATTGGAGCAAGGTCTTACAAACGTGGCAATGGTTCCCCGATAGATGGT
AATGGACATGGTACACACACAGCAAGCACAGCTGCGGGAGCCTTTGTGAAAGGTGCTAAT
GTATATGGCAATGCTAATGGCACTGCAGTTGGTATTGCTCCTCTTGCCCATATAGCCATA
TATAAGGGAGAAATATTTCAAGCTTCAAGAACAGCAAGGGATCTAATCGATTACTTCAAG
AGCTTCAAGAACAACAAGGGATCTGATCGATCACTTCAAAAGCTTCTTGTACCAGCTGTT
ACTTTGTTTGCTTGTAATAGTGCTTACATTGTAGGATTCGTTTTGTGA
