Microarray Probes on PGSC0003DMT400010042
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_44331_PI426222305 |
JHI_St_60k_v1 |
GCAAGTGTCTTGTTACCCCACGAAACTATCTAAATCCACAATAAATATACCATTTTGACT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400010042
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400010042 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G62810.1 |
+1 |
0.0 |
414 |
192/287 (67%) |
Copper amine oxidase family protein | chr1:23258253-23261772 REVERSE LENGTH=712 |
Transcript Sequence (2357 bp)
>PGSC0003DMT400010042 2357 pgsc_dm_v3.4
CAAAAACTCAAAACATCAATAGCCAACCATGGAAGGAAGAAATCTCTTCTTCCTCATGAG
TATAATTTTGCTCTTAATATTCACTTTCTTAAACTTACCATCTCCGCTTTCTCACACAAC
TGAGCAGCATTTCGACTGCACCACTTACTCCCCGTGGTGCAGTTCGAAAAAGCCCTTTTT
CCTCCGGAAACCGGAAAATTCTAAAACTCACTATGCTGATTTCCCCAATCATCCTCTAGA
CCCACTGACAATCGGAGAAATTCAAAAAGTGAAGAAAATCGTTAATTCAATTGCGGAATT
TAGGATTAAAGGTTGCGTTCTTCACTCTGTTGTACTCGAAGAGTCGGAGAAGGAGGTAGT
GTTGAACTGGCGGAAAGGTCACCGACTTCCGCCGCGGAAGGCGGCCGTCGTTGCTCGTGC
GCTCGGCGTCGTGCACGTGCTTTCCGTGGATATTGAAACGGGTCGTGTGACCCGACGTGA
AACGGGTAGTTATTCGGGTTACCCGATCCTGACGATCGAGGATATGATCACTGCCACTTC
TGCCCCGCTTGCTAGTTCTGATTTTAACCGTTCGATTATCCAGCGTGGCGTTGATTTGGC
TGACCTGGCATGCCTACCCATCTCCACTGGTTGGTATGGAAAAATCGAGGAGAAACGAAG
AGTGATTAAAGTACAATGTTATACATTGAAGGACACTATCAATTTCTATATGAGACCAAT
TGAAGGATTAACAGTACTTCTTGATTTAGACACCCAACAAGTTATCGAAATTTTCGATGA
AGGAAAGAGTATACCAATACCAAAGGCCGCCAACACAGACTATCGCTACTCCCGTATTAA
AAAAACACACAAAAAATAAACTTACTCAAACCAATATCAATCGAACAACCAGATGGTCCA
AGTTTCACTATAGAGAACAATCATCTAGTTAAATGGGCAAATTGGGAATTTCACGTCAAG
CCGGACCCGAGAGCCGGGGTTATTATATCCCAGGCCATGGTTCAGGATCCGGATACGGGG
AAGATGAGGAATGTTATGTATAAAGGGTTTACGTCGGAGTTATTTGTACCTTACATGGAT
CCATCAGATGCATGGTATTTTAAGACGTATATAGATGCAGGTGAATACGGGTTCGGGTTG
CAAGCGATGCCACTTGACCCGTTAAATGATTGTCCTCGTAATGCGTATTATATGGATGGT
GTTTTTGTGGCAGCTGATGGAACACCATATGTGCGCTCCAACATGATTTGTGTCTTTGAA
AGATATGCTGGTGATATTGGATGGCGACATGCTGAATGTCCAATTACTGGTTTCCCGATA
CGAGAAGTAAGGCCAAAGGTGACGTTAGTGGTGAGAATGGCAGCATCAGTAGGAAACTAT
GATTATATTGTTGATTGGGAGTTTCAGAACGATGGACTTATTCGACCTAAGGTTGGACTA
AGTGGAATATTGATGGTGAAAGGCTCTCCATATGTGAACATGAATCAAGTAAACCAAAAT
GAGTATCTCTATGGCACTCTCTTAGCTGAAAACATAATAGGAATCATCCATGATCACTAT
GTAACTTTCCATCTCGACATGGACATCGATGGTCCATCGAACAATTCTTTCGTGAAGGTG
AATCTCCAGAAGGAGATGACTTCTCCTGGAGAATCACCGCGAAGAAGCTACTTAAAAGCT
GTTAGAAATGTGGCTAAAACTGAAAAAGATGCACAAATTAAGCTCAAAACTATATGATCC
TTCAGAATTCCATGTGATTAATTCTAATAAGAAATCAAGAGTTGGGAACCCTGTTGGTTA
CAAAGTGGTTCCTGGTGGAACTGCTGCTAGTTTACTTGACCATGATGATCCTCCTCAGAA
GAGAGCTGCTTTTACTAATAACCAAATTTGGGTCACACCTTATAACGAATCTGAGCAATG
GGCTGCTGGCTTGTTTGTTTACCAAAGTCAGGGTGATGACACTCTTGCTGTTTGGTCTGA
CAGAGACAGGGCAATTGAGAATAAAGACATAGTGGTGTGGTATACATTAGGGTTCCATCA
TATTCCATGCCAAGAGGATTTCCCAATAATGCCAACAGTATCATCAAGTTTTGAGATAAA
GCCAGTTAATTTCTTTGAGAGCAACCCAATTCTCAATATTCCACCTAATTCTCCAAAGGA
CCTCCCAATTTGCAAAGCTGCTGCTTCTGCTTGATCATATATTAATTGTATTATATGTGC
CTACTATGTAAGAGAAAAATCATAAAGTCACCATTGAAGTTAACTCGAATTTTCAAAAAG
ACACCTTAACTTTGCAAGTGTCTTGTTACCCCACGAAACTATCTAAATCCACAATAAATA
TACCATTTTGACTAATT
