Microarray Probes on PGSC0003DMT400009950
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_28488_PI426222305 |
JHI_St_60k_v1 |
CTGGAGGAAAACTATTGAATTCTGTTGAACTCGTATCTTGTACTGTAGAATACAAGAAGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400009950
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400009950 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G22920.1 |
+3 |
7e-60 |
207 |
86/130 (66%) |
CHY-type/CTCHY-type/RING-type Zinc finger protein | chr5:7665143-7667031 FORWARD LENGTH=291 |
Transcript Sequence (2673 bp)
>PGSC0003DMT400009950 2673 pgsc_dm_v3.4
TAAAATAAAAAGTTGTTATGCATTATTGTTTGAACCCTTTTTGTTTCTTGTTCTTATCTA
CAAAAAAAATCCCAAAAGGGATTTTTGAGTATCCATTGGAAAAATATAATCTTGATTCAG
TAGAAAGGGTGAAGAAAATGGAGTGTAGTTTGAAGGAACATATAACCACTCTTTCTTTTG
CTGCTGATGAATCTGTGGCAGAAATGGCTTCTGGAAATTATGGGTGCTCGCATTATAGAA
GGAGATGCAAAATTAGAGCACCTTGTTGTGATGAGTTATTTGATTGCAGACATTGCCATA
ATGACTCAAAGAATTCTTTAGACGTTGATCCACTCAAACGACACGATATTCCTCGCCATG
ATATTAAAAGGGTCATTTGCTCATTGTGTAATACTGAACAGGATGTTCAACAAAAATGCA
TCCAATGCGGGGTTTGCATGGGGAAGTACTTTTGCTCAAAATGCAACTTCTTCGATGATG
ATGTCTCGAAGAATCAATACCACTGTGATAAATGTGGAATCTGCAGGTTAATATCTTTCT
CATACTGTACATCATTATCGGTTCTCTAATGCATTTTCCTAAATTACACCATATTTGTGT
AAACACAAAGCCAACGACATCTGAAACATAGGCTGGTCTGTAGTCACAAAATGGGATGAA
GGCAACCTTTCTTACGGAGGCACTTCATTTTAAGTGCACGCTAAATAATATCCCGTTAAC
GAGTTCCATATGTAATTAGGATTACTTGTGGTTGATTATAGATGGTATGGATTAGAAATG
ATTCAGTCGAGTTTAGTATTCTTGTGTCTCTTTACTTTTTATACCTGCACTACAGCCATA
AAAAGACAAGCTATGTTGCTCGGACTCTTCAAAAATGTTGTTGCATCCGTGTCAACAACA
TACCTAGTGTAATCCCACAACTGGGGTCTGGGGAGGCTGTCTACGATTAGACACTCAGCT
CAAGGAAAGCAAAAACACAACACTTGTGGAAACATAACCCGTAACAACAACATGATAGTA
ATAAAACCGAGGGATAAGAGAACAAATAGTAATAGAAAACTAAGAATGAGAAATATGGAA
ATAATAAAAATAACGAAAATAATACTAGTAGTACTACCATTTCAGTTAAACTTACATCAG
TTGCATCATCTGCACATGCCATTGTATATTTTTGGTGTGGTAACGTGGTGTCTATGTGTA
TTATTCATCATTTTCCGGTTCAAAATATTTGAAAACAGAACGGGTGGCGAGGAGAATTTC
TTTCACTGTGACACATGTGGTGAGTGAGATGCTCAACCTTGAATTAGAACTTAATTCAGC
AATAAAAGCTCTTATCAACAATGTTGCTCGGACTCTCTAAAATTGTTGTTGGTGCGTGTC
GGATCCTCCAAGAGTAGTGCAATTTTATACTTTTGGGTTATCCGTCATCAGTGCAGCAAC
ATTTTTGGAGAGTTTGAGCATCATAACTTATTAGGTTGTATTTAGTTTGTTAGTGTTATG
TAACATCCTTCCTTTTGCAGGATGCTGCTATACAAATTCGATGAAGGAATCACATAAATG
TATAGAAAGAGCGATGCACCACAATTGCCCTGTTTGCTTTGAGTATATTTTTGATACAAC
AAAAAACATCATTGTCTTGCCTTGCGGTCACACAATGCATCTGGAATGTGTCATGCAGAT
GGAACAACATTTCCAGTACGTATGTGACGTGTTATGATTTTCTATGAACAATCAATTCCT
TAATGATCCCATAACAGAACACCCCTCCCCATTTGGTCTATGTTGCTCGGACTCTTCAAA
AACATCGCTAGTTGTTTGTCGGATCCTCCAAAAGCTATGCATTTTGGATGATCCGAGCAA
CATAGATTTTGGTTGCATTGTGCTCGGTTCCAATAATTTGTGCATGCAGGTATTCTTGTC
CTGTTTGCTCAAGATCATACTGTGACATGTCTCGAGTCTGGGAACAACTGGACCAGGAGG
TTGCGTCAACAGCTATGCCTGAAATGTATCAGGACAAGAAGGTTTGGATTCTTTGCAACG
ACTGTGCGGAAACATCTGAGGTTAACTTCCATATAGTAGCACATAAATGTCCAAGTTGCA
AATCCTATAATACAAGGCAGACAAGAGGAGGGTCCAGTTCATGCTCTAATATTACCGATA
TGATCAGATGAGGTTCTTGATCGCGACATTGGATCAGATTTTTTCTTCAAATTACTATTT
GCCTGATTATAAACGATGAAATCAATGCCCACGAGTCACGACTGCAACAATTGGTATGAT
TATAACTTCATTATTTTCCATGAGTTTACCTCAGAAAGCATCGAGGAGGAATTTACATGT
CATTGCTTGCAACAAGGGAGTTGTTGAACATTCTTTACTTATTCTTTCACGTAATCTCTC
TCTGTATTGCTTTATGTAGAGATGGATTTAGGATTTTAATTTTATAAGTTCTGAACTCAC
AGTCCTTTTTTACTTTTCTAGCTTCGAGATGGATTAGTTATATGTATTGAGTGGATTCTC
CTCAACACAAATACAAGTTCTGGAGGAAAACTATTGAATTCTGTTGAACTCGTATCTTGT
ACTGTAGAATACAAGAAGATATTCCAAAATGAACTTTGATTAGTAGTATTTGTGCAAAAC
TTAATTAAACTTGACAACAGTGTAGATTTTGTT
