Microarray Probes on PGSC0003DMT400009916
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_28524_PI426222305 |
JHI_St_60k_v1 |
CTCTTGCTACATGTTTAAGTGGTTCTAAGTATATCATGTTTGTACACACAAGGTCTTTGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400009916
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400009916 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G03370.1 |
+2 |
1e-40 |
141 |
70/111 (63%) |
acylphosphatase family | chr5:825798-827020 REVERSE LENGTH=171 |
Transcript Sequence (879 bp)
>PGSC0003DMT400009916 879 pgsc_dm_v3.4
GCCCTGTTTGCCTCAACCAGGCTCTTCCCACCATGTCTCCTCTTGCGTTAAATCTAGAAC
AAAAAAGAATGGTGGAAGGAATACGAATCGAATGGCATTGGTGGTAGCTTCAACATCTCT
ATCTTTTTCTACAGAGAGAATCACTCGTCGTTTCACAAATTCACTCTTCAAATCCTATTT
TATTACGAAGATTAACAAGAGCAATCTAGACCCACCATTGCAGCAATGGCAAACAAGATC
AAGAATCTCGTTTATTATGCATAACCATAATGTTGTTGATTCATATAAAGGTGTAAAAAG
AGCTTCATTTCAGCTTCCTCTGTTACTACTACCTCTTCGTGTTGGTCGAGGTTCATCTCT
TCCGTTTCTGCACAAATTCATTTCATCTCCTATGTCTTCCTTAAATTCCGATGCTAACCC
TGATGTTAAAACGGTTAGAGCTGTGATTAAGGGGAGAGTGCAAGGGGTGTTTTACAGGGA
CTGGACTGTGGAGAATGCTAAGGAATTGGGGTTAAAAGGTTGGGTTCGAAATCGGAGGGA
TGGATCGGTGGAAGCTTTGTTTTCTGGAAGCCTGGAAAAAGTTCAGGAAATGGAGCAGAG
GTGTCGGAGAGGTCCACCATCTGCTATTGTCACTGGACTAGATGTGGTCCCCTGTGATGA
TGACCCCGGAAGTGGGTTTGAACGCAAACAAACTGCTTGATCATAGGCTAGCCTTTTGGT
AAAGACTAAGCCCAACACGTTTTCTGTTTTCTCTAACTTGCTCTTGCTACATGTTTAAGT
GGTTCTAAGTATATCATGTTTGTACACACAAGGTCTTTGAAATGTTAAGGATTTTATTGT
TACATGTTCTTATTGATGTTATGCTTACATTCACTGATT
