Microarray Probes on PGSC0003DMT400009744
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_34762_PI426222305 |
JHI_St_60k_v1 |
CTTTGTACAATGCATCTTTGTGGTGAGATCAAGCAAATGAAATCATTGAGATGCAGATTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400009744
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400009744 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G35960.1 |
+3 |
2e-115 |
357 |
192/322 (60%) |
Protein kinase family protein | chr5:14108524-14110536 REVERSE LENGTH=429 |
Transcript Sequence (2118 bp)
>PGSC0003DMT400009744 2118 pgsc_dm_v3.4
TTCGACCGTTCACTTGTGTTGTGGAACTTTGTACTTCCTTCAACAAAATCTCTCTTCATC
TTCTTTCTGATACGTATGAGCTTTAAGCCATGGAGAAAACAAAAGTGAATGCATTTTCTC
CAGATACAGTTCTTGAAGACTTTTTGAGGACAGCAGAATCTGAATCAGACTCTTCGAAAG
CCAGCACATCGGAATTTGATGGCTCGAAAAATCAAAGATCTAGTTCGAGATGGACTGGTT
TTCTCGAGCTATTTAGAAGTAAATCGAAAGGACATATGACGAAAGATCCTTTAATTAGTT
CTCTGAAACTGTCCAAAAGGTTCAGCAGAAGCATGAGAGAGACGAGTAGCGGTGACATGC
CGAATTCTATCCTGGATAATGGTTTGAGCTATTTCAAACCTCAATGGAAACTTTTCACCC
TATCTGAGCTTCAAACTGCAACCAATTACTTTCATCAAGAAAATTTGATAGGAAAGGGTG
GTTATGCTGAAGTTCATAAAGGACGGTTACGAAATGGCCAGTTTATCGCGGTTAAGCGGC
TGACAAGGGGACCACAAGATGAGAGAATAGGGGATTTCTTATCTGAGCTAGGTATAATGG
CACATATCAATCATCCAAACACTGCTAAATTGATCGGTTATGCCGTTGATGGAGGACTCT
TTCTTGTGCTTGAGCTATCTCCTTATGGAAGTTTGACCAATATGTTGCATGCATCGAAGA
AGAAACTAGAATGGAAAATCCGGTATAAGGTAGCGATAGGGATAGCTAAAGGGATATTTT
ATCTTCATGAGGGTGGTCAAAGAAGGATTATCCATAGAGATATTAAGGCAGCAAATATAT
TGCTCACGAAGGACCTCGAACCTCAGATATGTGATTTTGGGCTAGCAAAATGGTTACCAG
AGCGATGGACTCACCTCACTGTAGGAAAATTCGAAGGAACATTCGGCTATCTTGCTCCCG
AGTTCTTAATGCATGGCATAGTGGATGAAAAAACTGATGTTTTTGCTTTCGGAGTGCTTC
TTTTGGAACTTATTACTGGACGTCGAGCCCTTGATTACTCACAGCAAAGCCTCGTCATTT
GGGTATCCCTCGTTTCTTCACCATTGTTTTACGATATACACCAACTAAGCAAAAGAGTTT
TTGCACTAATAACTGATGTGTAAAATAAGATAGTACCCTGCTACTACATGTTAAAATGCA
CTGATAATGTTAAAAAAGAAATGAAATTGCAATTGTAGTGCATATAAGTTATGTCCGTCA
TACGTTTGCCTCTTGCATAACTTATCCATCATTTTTATGTCGGGTAAACACGTTGAACGC
TCTTTTTTGTTTATTCTAGGCTAAACCCCTGCTGAAGAAGAACAGAATCAGAGAACTCGC
TGATCCTTCACTTGCGGATGACTACGACTTACTACAGATGAACCTCATGGTCTTAGCTGC
TTCTTTATGTGTCCAGCAGTCTTCAATTAAGCGACCCCGAATAAATCAGATTCTTCAGCT
TCTAAGAGGCAACAGCGAAAGCCGGGATATAATCATGAGAATTAGAAAACCATCACATTG
GAAGAGGTATTATGAAGAACTCTTTAACGCTGAAGAAAACAAAACGACTAGAGGGTTGAG
TGGTTTAAGTCTGCAGGAACAAATAGCATTGGAAGTCTCTTTAAGATAGTGTGATGAATC
GAGCTCGACGCTCAAATGCTTGTTTGGTTTGTTAAAACTGAAAAACATCTTATTGAAGAG
TGAAGGAATTGGATTCAGTCAGTTTCTCCATCGTAATTATGGTACAACACGAAGTTGCAC
ACTGGATCAATGCTTGTGTTGGTACGTGGAGGCAGATTTGGGACTGAACCCAAGTTGAAC
CTATTACTTTTGGATCGAACCATGTATATATTGATATTGTAAGAGTACGCTCATTTTGAA
CTTAGTGACTTTTAAGTCTTGGATTCGTCTCTGTTGGTACCTACCTCGAGAAAAGAAGCT
TATAGCAAGAAAAAAACGTGATGGATCTTTGTACAATGCATCTTTGTGGTGAGATCAAGC
AAATGAAATCATTGAGATGCAGATTTTTTTTTTTAGTTTTTATGACATGTAAATACTTAC
TATAATCAGAGATTTGTA
