Microarray Probes on PGSC0003DMT400009725
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_34743_PI426222305 |
JHI_St_60k_v1 |
GTGATGGATTATGAGACTTACTTTATCATCCTTTGATTGGAGTAGGGACGGAGCCAAGTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400009725
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400009725 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
ATCG00020.1 |
+1 |
8e-11 |
49 |
23/27 (85%) |
photosystem II reaction center protein A | chrC:383-1444 REVERSE LENGTH=353 |
Transcript Sequence (1475 bp)
>PGSC0003DMT400009725 1475 pgsc_dm_v3.4
CAATCTCCAAAATATATAATCTCCATCTCCTCTGCATCTAACCTTCTCCCAAAGTGTAGT
CTAAAATGGAAAAGAACCAAACCATCACCAAAGACACTAAATCCCAGCAAGGCCAAGGGG
TATGTGAAAAGATTTTCAAAGCACTAAATCTAACTTCTGCCTTTCAATATATTTTCAGAA
ATCCAAAATCCAAAATAGCAACTAGTGATCATCATCAGAGAAGCGACCCTGCTAGAACCA
CAGAATTCAAGCTAGTTGTTCCTCAACAAGATCAAAACTTGTCTTTTGCCTCAAATAAGG
TACATGTGGAATATAATCATAGTGAAGTAACCATGTCTAAAACAGAATTAGCAACTAGTG
ATCATCATCAGAGAAGCGACCCTGCTAGAACCACAAAATTCAATCTAGTTGTTCCTCAAC
AAGATCAAAACTTGTATTTTGCCTCAAATAAGGTACATGTGGAATATAATCATAGTGAAG
TAACCATGTCTAAAACAGAATCCCCTGTACATATGCTTCCAGAGAAAGATTATTCAGAGA
GTGCCAGGTTTTCTACGTATATCAATCACGTCAAGAGCAAGATTATGTCTAGCTATGATG
ATGATGATGATAAACATAAACACCGTATCGATCCATCCAAGTTTGATATCAGAACTACAG
CTATTGCTTGTGGGGATCAAGGCTAGTACTTTGAACAATCTTAGCAAACTTGTATGTTTA
GCTATCCAAATAATTTAGACAAGGAGATAACTTGTTTAGTGCTCTATGTATTTGTTATGT
ATGTTAGTAGTACTAAATGTTTTAGCAAAGATTGAACTTTGGAAAAAAATAAAATAAGAG
AGGGGTTATTAAGCTTTTGTTTATACTTTATCTGTGAGTGATGGATTATGAGACTTACTT
TATCATCCTTTGATTGGAGTAGGGACGGAGCCAAGTGGGAGCAAGGGGTTCATATGAAGC
GCCTTGAATATTACATTGTATATTTAAGGTTAAAGTTATTATTTCTAGTTTGATAAGGGA
AAGCACAGAAAATGAATCTGCTAATGAAGGTTATGAAGTTCGACATCAATAAAGAGAAAG
ACTTTCCTCTAAAATGCTAGATTCCATCGTTAGGGCCAGGGACAGAACTCCGGGCACATA
ACTCATGGGGGAGCACTCTCCGGTTAAGAGGAAGAAACTTAGAATATCGTAGCCGCTCAT
GCTTATTTTGGCCGATTGATCTTCCAATATGTTAGTTTCAACAGGTTTATATATATAATA
GATGTTGAGTATATTTGTGTGTTATGAATTAAATCTGGAATGTAGAGATACAAGCAATAT
TGGAAACCAGCTAATGTCTTTCTTTGTGTTAGTTGTGCTGCTATTTTAGAGCAATGGTAA
AATGTGCGACCTATAGGTCATGAGTTTAAGCTATGGAAAATAATTACTAATGCATGTATT
AAGGTACACTGTCTATATCACACCCCTAAAGATAT
