Microarray Probes on PGSC0003DMT400009411
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_4967_PI426222305 |
JHI_St_60k_v1 |
TGTACCTTATGATTGCAATAGAACAGTGAGATTGTATAGTGCCACCTTGTTCCACAGCCA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400009411
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400009411 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G35880.1 |
+1 |
1e-35 |
133 |
62/83 (75%) |
Eukaryotic aspartyl protease family protein | chr4:16993339-16995721 FORWARD LENGTH=524 |
Transcript Sequence (747 bp)
>PGSC0003DMT400009411 747 pgsc_dm_v3.4
CCTTTTATCATTTTATGATTCATAATGGACAGTCCTGATGCAAATACTAGCTTGATTCCT
AGTTTAAGCCTAACTATGAGTGGGGGAGGCCAACTTGCTGTCAATGATCCCATTATTGTC
ATATCCACACAGAATCAACTAATGTATTGCCTGGCCATTGTGAAGAGTGATGCTCTAAAT
ATAATTGGACAAAACTTCATGACTGGATACCGCTTTGTGTTTGATCGAGAAAAAATCATT
CTCGGTTGGAAGAAATTTGATTGTTATGACATTGAGAAAATAGACCATTTCCCATCACAA
CCCGTTAATACCACCCGTGTTCCACCTGCCGTTGCTGTTGTGCCTGGAAATGATAATGCA
GAAAGATCACATGAAAGGACTACAAATACTCGTCAAAGTTCTTTTGCATCTTCTGTTTTT
CAAACATGTTATTTGAACCTCATAAACTGCTTCCTAGCATCTCTGATATTGCTACTTTTA
TAATAGCTACCATATGGTCATTCTCACACTCAGGACTCAGGTATGCTTCTTAGGACTTTT
AATACATATATAGTGCAGATAATCAAACTTGCAGAGCTCCAATATGGACAGAAATTTTTG
GTTTGCCTGCTCATATCTGATTTTGAGGCTAACCCATATATATAATGTATAGAAATGTTA
ATACATTACACTATGGTAGTTTATGTATGTACCTTATGATTGCAATAGAACAGTGAGATT
GTATAGTGCCACCTTGTTCCACAGCCA
