Microarray Probes on PGSC0003DMT400009257
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_5387_PI426222305 |
JHI_St_60k_v1 |
TCATAGTAATGGTGGTAAAATTACCCCATGAAAACATAATCTTACTTGTGAGCCGTCTAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400009257
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400009257 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G66050.1 |
+3 |
1e-46 |
171 |
95/242 (39%) |
Wound-responsive family protein | chr5:26412333-26414428 REVERSE LENGTH=340 |
Transcript Sequence (2613 bp)
>PGSC0003DMT400009257 2613 pgsc_dm_v3.4
GTTTTTGTATTGGGGAAAAGGAATCTCGTCCTCGTTGTGGAAGTGCAGTATTTTAAAAGC
CACTTCAACATCTACGATGCTCCATTCCTTCGCCCAACAAGAAATATTTTTATCTTTTCC
CACCTAATTTATTTTATCCCTAAATCCCCCTTTTTTCTCCTCTCTCTGTAAACCCACATT
GAATTTATCGTCTAACAATGCTCGGCGTTGAGTTAAGGATCTCTACCGTCGCCGGAGTTT
TGACGGATCTACCGGAAACAAGTCACCGGAGTGCCAGCTGGAACTGTAACTCCTCGATTC
GAAATATCTCATATCATCTCTCTTCCAGAAATAGACATTGTAGAAAGTCTAGATTCATGG
TAATCTGTAGCAAGTCATCACGCGGAAGCTTTAATCGGAAATCTAATCAGAGTGATGAAC
CGGGTGATGATTATATTGAAGCTGTCGTCCTCGTTTCAGAGACTATGAAGCACTACAAAA
TGCATATGGGTGGATTTCAAGAAGAAACAAGATGGCACTCATCTGCTCACCTGATTCCCT
CTTCTTTTCACCCTAAGGATCGTATCGCTGATGCATCATCTTTAGGGACAGGATTTCTTC
GCCGTTTCAAGAATCCAACTATTTTTCTTAAGATTTCCTGTGATGCAGAATATGTCTTAC
CAATTATTGTTGGAGAACATGCTGTCGAAAAACTTATAGATTCATTGCATGAGGAGGATA
CTGGGGATTGCCCCGACGAGTTCCTGCTTTTGAGGAATCTATTGTTGAAATCTGGCTATG
AAGTTAAAATGGTGAAGATTACAGAAAGAGTGACTAGTACTTATTTTGCCAGAATATTTT
TCCACAAGGCAGGGGAAAAAGATATTTTTAGTGTGGATGCTCGTCCCTCAGATGCCATTA
ATGTTGCCAGAAGATGTAAGGTATTGTTCTTGTGGGACTTTGAGATTCAAGTGTGATAAT
GAATTGCTTCATAAAAATTGCTTACCATTGTAGAAAACATTATGTCTCCTAACTGTTTTC
CATTTGACCTTTTTGTTTCCTAGCATTCTGAGATGAAAAGATTGATCTCTCTTCCTTGAG
ATTAGGGTCTATCTGAAACAGCCTCTCTACCTTCCAAGGTAGGGGTAAGGTCTGCATACA
CACGACCTCCCTAGACCTACTTGTGAGATTACTTGGGAACTTGAGGTAAAGTTGTATGTG
TATGATCAACTTCTTTTCAGTTTTAGCTCCTTTAGAATCAGTCTTACTAATCTTACTTGA
GCTGTAATGACCTAACTACAATTTTGAAAGCTGTTATCTGTCTTAATTGAGCTTGTTCTG
GTTTGTGCAGGCACCAATATTTGTGAATAAGCAAATTGTCTTGACTGATGCAACAAGAAT
AGGTTATGGAATGGACCGATCTAGTAGAATTAAGTCCACCTATGATGTATTATTAGATAG
GTTGGCCTCTTTTCTCTCCTATGTGCATTTCTTTGGACTTCTTCCAAACTAAAGATTAAT
TCTGTTTGGTGCAGTGCATCAGATGGCCCCGATTTACTTTCTGAAGAACTTAGTGTGCTG
AGAAATATGAACTTAGCAGTGAATGAGGAGAGGTACAATGATGCAGCTATGTGGAAGGAC
AAACTGATGAGACTTCGTGAGTTCAAGACATGAGCTCTACAATCTTTCTCCAGAAATATA
ATGTAAATATTCCTTCTGGATTGATGGCAGCTATGACACTGCGCTGTATTTCAACATCAC
ATTAACAAATGTTTCAAGGAATCAATAATCTTCAGGGAAGTTTGAAAATTATTGGTGTGT
ACATGTTCCCCTTGTTTTAGAAATCTTGAAAAGTAAATGCCTTACCTACGTTGTGTCAGT
TGGGTTTTTATCTAGCTAACCCAACAATGCAACCTCTATGTAAAAATGTATATAGTTTGA
TTGTTGTGAAGAATAAATCTACTATGTGAAAATAGCATGTGCACATTCAAGATGAACTCC
TTCTGCGCCAACAATAATAGTACTAAACTATTGAACGAAAAGAGATGAGATCAAGCTTTG
AAGTTGGTAGCTGAAAGAAAGCTGTCCGTGAAGGTCAGCAAAGACGAGAGTTTGTTTAGC
GCAAATCAACAAATATTGCAAAGATGACACGACTTAAAAGCCATGTGGTGATATATTACC
ATGACACACAGATGGTGTCTTTCCTGTGCCTCTCATCAGATAGTTGTATATAAGTTAAGA
GAAGGGGCTGGAGTGGCTATGCTCAAGTTATATGTTGTACATTTGATTCCATCCATATTG
TTATATCCAGATTAGTAGAATTGGGAAGATTTAAGTTGAGACTGTAAAGTAAGAATTATC
GGAAGGGGGTTCCTTGTCAAATTACCTTTCAAGCAATCAGCATCTCCAGTTCTTTTTCTG
TAGAAGGCAGATTACATAAGCTGTTTACACATAGTATATTGTTTTCTTTGCTGTTTTTCT
ACCAATAAACGCCAACTTCCCCTTCCCTTTTCGTTTTTGCTCTTTTGTCAATCACTTAGT
GCGTCCACTAGTTCAATACATCACTGTATGCACTCATAGTAATGGTGGTAAAATTACCCC
ATGAAAACATAATCTTACTTGTGAGCCGTCTAA
