Microarray Probes on PGSC0003DMT400009202
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_4956_PI426222305 |
JHI_St_60k_v1 |
ATTTCAGGTTCTGAATCAGAGTCAGAATCCGGATCATTACCCGGCTCTGAATCAGGATCA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400009202
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400009202 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G38660.1 |
+1 |
4e-97 |
294 |
155/223 (70%) |
Pathogenesis-related thaumatin superfamily protein | chr4:18066448-18067984 REVERSE LENGTH=345 |
Transcript Sequence (945 bp)
>PGSC0003DMT400009202 945 pgsc_dm_v3.4
ATGAGAATCTCTATGGCAATTATCTCCACTTCTTTGATGATTCTCACCCTTCTTTTGCTC
ACCTTCTGTCAAGGTATATTGGGGGCTACGTTTACATTTGTGAACCAGTGTGACCATACT
GTGTGGCCTGGAATTCTGGGCAGCCCAAAACTGGATAGCACTGGTTTCGAGCTAACCAAA
GACACTTCTCGTTCATTTCAAGCGCCGACCGGCTGGTCAGGCCGTTTCTGGGGCCGAACC
GGCTGTAATTTCGACGATTCGGGAACCGGTACATGTGCAACAGCCGATTGCGGTTCCGGA
CAGATGGAGTGCAACGGCGGAGGAGCTGCAACTCCGGCGACACTAGCAGAGTTCACACTC
GGGTCGGGTTCTCAGGATTTCTATGACGTGAGCCTAGTGGACGGGTACAATTTGCCTATG
ATGGTGGAGGTGAGTGGCGGGTCGGGTTCTTGCGCATCCACGGGTTGCAACGTGGACTTG
AACCAAAAATGCCCGACGGAGCTAAGGGCGAACGGCGGCGGCGCTTGCGGCGGCGCTTGT
AGGAGCGCGTGTGATGCTTTCAAGACTCCACAGTACTGTTGTGAAGGCGCTTATGCTTCG
CCGGCGACGTGCTCGCCGTCGGTGTACTCGCAGATGTTTAAGTCGGCGTGTCCAAAATCT
TATAGCTATGCATACGACGATGCAACAAGTACATTCACATGTTCTAATGCCAATTACATC
ATCACATTTTGTCTGTCCTCTCTAACCAGCAAAAACTCTTCAAAATCAGACGAATCGACA
CCTGAGTCAGGGACCGAGTCAGGTTCTGGATCAATTTCAGGTTCTGAATCAGAGTCAGAA
TCCGGATCATTACCCGGCTCTGAATCAGGATCAGGGTCAGGGGAGATGGGTCAGACCATG
CTAGCGGATGGATCTTGGTTAGCAAGTTTGGCGGTTCACTTTTGA
