Microarray Probes on PGSC0003DMT400009189
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_5050_PI426222305 |
JHI_St_60k_v1 |
CGTCATTCAAAGCCTGTTGTATATTTTTGTGAGGCATAGTGGGAAAGAGATTTTTAAAAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400009189
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400009189 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G17880.1 |
+3 |
5e-23 |
93 |
43/62 (69%) |
Chaperone DnaJ-domain superfamily protein | chr2:7767176-7767658 REVERSE LENGTH=160 |
Transcript Sequence (1039 bp)
>PGSC0003DMT400009189 1039 pgsc_dm_v3.4
TCACTGAATTGATGAATCGGATAAGCAGAAGTGCTGACTCACCAAATACATAAAACGGAT
AAGCCTTCCTTCCATAACTTCTTTGTCCACATAATTACACATTGGCCCCCTCCATTATTT
ACTTTTCTTTTTGGTCCCCCCAACTTTTCACATTTCAGTTACTCTTTTTGGCCACAGCAC
AGTTAAAACTTCATCCCATTCTTCTATATAACTTTAGCCCCTTCGCCTTCTCTGACTCAT
TACACTCCACAAAAAAAAAAAAACTAAACATGCCCATGCTATCTACTTCCCCTCGTTCGT
TTCTTCAAACTCCGCCACCGCCGGTGAATATATTTTCCTCCGGCGACAATTCTGTTCTAT
CACCGTCTTCCGTCAGATTCCGTCAGTCCGGTATCTTCACGACCGCCGCAGCGGCGACCT
GTGCTTCCGTCGAAACTGAATCTACCACGTCATCGGCTTCAAGGTACTCGACGCTGCCTT
CTAACCTTGTCCATGCTTCTCCGGCGTCTTTCTACGAGATTCTAGGGATTCCGATCGGCG
CTACGATCCAGGAGATCAAGGCAGCTTATCGGAGATTAGCTAGAGTTTGCCATCCTGATG
TGGCGGCAATTGATCAGAAGGACACGTCGGCGGACGATTTCATGAAGATTCATTCTGCCT
ATTCTACTTTGTCGGATCCGGGACAAACGTGCCGATTATGACCGCCGCCTACTCAGAAGG
CGCCGGAGTGTCAATTTGTACTCCGGCGGCTGTTCTCCTTCAGCAATGTCGGGATTCACC
GGCTATACTACCAGGAACTGGGAAACAGATCAGTGCTGGTAGCTCTCTCCGTCATTCAAA
GCCTGTTGTATATTTTTGTGAGGCATAGTGGGAAAGAGATTTTTAAAACGGAAAAAGAAA
AAAACAAAAAGAAGAAAATTAGCTAGATTTGCTATGTTTACTGTTATCTGATTAGAGTTT
CTACTTTGTATATGCTGATTATTATAACTTAATACTAACATGAATTTCAAATCTCAGAAT
TCCACTACTCTACAATTTC
