Microarray Probes on PGSC0003DMT400009115
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_5419_PI426222305 |
JHI_St_60k_v1 |
TCTGACTTGATGTGTTGAAGTAGTAATTGTGGGACAGTTGAGAAAATTTTATTAGCGGAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400009115
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400009115 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G66330.1 |
+3 |
1e-141 |
420 |
242/416 (58%) |
Leucine-rich repeat (LRR) family protein | chr5:26500531-26501787 REVERSE LENGTH=418 |
Transcript Sequence (1661 bp)
>PGSC0003DMT400009115 1661 pgsc_dm_v3.4
CTTTCTTTGTTTGTTCCCTTCTTTGGACACACAATATATCCTCATGAATCCATTTAAAAA
CTAATCTTGAAGGCTCTTCTTCTTCATCAATTCTCATTACGATAAAAAAAAACCACACAG
AAAAAATCCAGAAAATGGGTTGTTTTTCAATTTCTACTGTTCTGTTCTGTATAGTTCTCT
ATGCTCTGTTCTTGCATGCGCATTCAACTACTCACTGGCAAGACATTGAAGTCTTGAAGC
AGCTGAAAAATAGCGTCGACCCCAATTCAGTGTCACCTGGTTCATGCCTGAATTCATGGG
ATTTCTCTGTAGACCCTTGTGATAATCTCGGGGGTGAAAAATTCACTTGTGGTCTCCGTT
GCGACCTTGTCGTTTCCTCTGTTAGCCGAGTCACTGAACTCGCTCTAGACCAGTGGAATT
ACTCCGGTTCACTCACTTCTGTCTCTTGGAATTTGCCTTATCTCCAAAACTTAGACATCA
CTAATAATGCCTTCTCCGGTTTAGTACCTGAGTCACTCTCGAATCTAACTCGGGTTCAAC
GAGTCGGTTTATCAGGTAACTCGCTATCCGGGTCAATTCCGAGTTCACTGGGTTCACTTT
CAAACCTTGAAGAGCTTTACCTTGACAATAATTTCCTTGAGGGAGAAATTCCCCAAAGTT
TCAACGGTCTCAAGAATTTGAAACGGCTCGAATTTCAAGGCAATCAGATTACTGGCGAGT
TTCCCGAGTTGGATCAGTTAATTAATTTGAATTTCATCGATGCTAGTGATAATGCCATCT
CCGGCGAACTCCCGGCGAGTTATCCGGCTTCTCTCATCGAGCTTGCGATGAGAAACAACA
GCATAGAAGGTAACATTCCGGCGAGCCTCATCGGACTGAATTTCGTACAAGTTATCGATC
TGAGTCACAACAAACTCAGTGGGTCAGTGCCAGCGAGTGTCTTCACTCACCCATCCCTCG
AACAGCTCACCCTATCATACAATCAATTCGGGTCGGTTCAGGAACCCGGGATCTCGTTTC
AGAATAGTCAGCTTATTGCAGCAGACTTAAGCAACAATGAGATCCGTGGGTTATTACCCG
GGTTCCTGGGTTTAATGCCCAGATTATCATCACTTTCACTAGAGAACAACAAGTTATCGG
GTATGATACCGACCCAATATGCATTGAAAATGGTGTTTCCGGGTGAAGGGGTGTCTCAAT
TTGAGAGGCTACTGTTAGGAGGAAACTATTTATTCGGACCCATACCGAGTCCATTGTTGG
ATCTGAAAGCGGGTTCATTCACAGTGAGATTAGGAGACAACTGTTTGTACCGGTGCCCGT
TGAGATTATTTTTATGTGAAGGTGGGGAACAGAAATCATTATCGGAGTGTCAGGCTTTTG
GTCCCATCATTCCTTGAGTAATGTGATAATGTCTTTACTTTGAGGTCCTCGTTTTCATTT
TGTACTAGTAATTATTGTATCGTTTCAATTTTATCGGAAGGGACCAGTAAGTATTGTATA
AATATATTTTTTCCTGCAACCTTACCCCATGTATGGGGTTTTAGATATGATCTATGGTAG
AGTTGTTATTGTTGTGAAGAGTGAGACAGAAATATAAGATTTCTGACTTGATGTGTTGAA
GTAGTAATTGTGGGACAGTTGAGAAAATTTTATTAGCGGAT
