Microarray Probes on PGSC0003DMT400007975
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_30636_PI426222305 |
JHI_St_60k_v1 |
TAGGATTTCTCAGCACAAATTGCAGCAAAGCTCCAGTTTTCTTGGAAATAACCCTCTCAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400007975
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400007975 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G29390.1 |
+2 |
7e-62 |
205 |
118/192 (61%) |
cold regulated 314 thylakoid membrane 2 | chr1:10286409-10287878 REVERSE LENGTH=226 |
Transcript Sequence (1579 bp)
>PGSC0003DMT400007975 1579 pgsc_dm_v3.4
GTTCAATTGAATTACGATCTAAATAGGGTAATGGTTCAATTCTATACAGGGAATTGTCCA
ATGATTCAATAATCCAAACGAGGCAGAGTTATCGTTGTCCAACTCATCTCTCTTCGTTCG
ACAAATGGCACACTATTTCTTGTACGTATAATTCAGCCCTCTCTATATACTTTCACTTCT
CACTCTCCCTCACCATTTTCCTTTCATTCTCAGGCGACCCATCGCTGATTTCCACTTTGT
TTATTTATCTTCATTCGCCGGCGTATAAGCCAAATAACTTAAACAGTTGAGGAATTTTAA
ACAAAGATATAGAATGATGTCTCTTTCTCTTTCTCTTTCTCTTTCTTATCCTACACACCA
TTTTGCTTCCTACAATAAACAGCTATGCGCTTCGAGATCTCCTCAATCTCATCACACTAG
GATTTCTCAGCACAAATTGCAGCAAAGCTCCAGTTTTCTTGGAAATAACCCTCTCAGAGT
TCCAATTGATCTAAGTGGAGATAAGATGAAGAGACGTGGAGGAGTGGTTTGTTCTGCTGC
TGCTCTTGCTCCTAGAAATCTGCAGTGGGTCTGTACTATTTCCTCTGTGGTTCTCATGCT
TGCGAAGGGCACTGCTATTCACAAGTCTTTTCTTGTTCCTTTATTTGCTTTACAAGCTCC
TACGGCAGTTGTCTCGTGGATCCAGGGTGAATATGGCATTTGGTCAGCATTTTTGGCACT
TCTTGTTCGTCTCTTCTTCTCCTTTCCTGGTGAACTTGAATTGCCATTTATAGCATTATT
GATGGTAATTGTGGCTCCTTATCAAGTTGCAAACCTAAGGGGGACAAAGGAAGGTGTCAT
TCTTTCCTTGGCAATAGCAGCTTATCTGGGTTTCCAGCATTTCACACGTGCTGGCAGCTT
GCAGAAGGCGTTTGATCAAGGTTCAATTATTGCCACCCTAGCCATCATTTGTATTATTGC
TGTGCCATGCTTGCTCTTGATTTGATGTTAAACTACAGTGATTTCTCAAAGGAGTCCTGT
AAATTATTTGAGTCATTTGAGGGTTGGAGATCACACAAATAAATATCTTTCTTTAAATCC
CTCGTGTAAATTTCTAGCTGTTTATCCAGTCAAGTTTTTGGGACAAATTAAGGTGAATGT
ATTTATACAGGAATAAATTAGATGAACAAGCTTCCATTAATATCTTATTAATTTCTATAC
TTTGGGCAACATCTGGTGCTACTTATCAACGAAACAAAATGATTCTTATTTTGGGTTTTT
CCATTGATGTAAAGAAAGAAAAAGTGTTTCTTTGGGCTATCGCAAGGAATGAGTTTGCAA
ATTCCAGTGGTTCCTCCAAAAGATAAATAACCTCCTTCCAGATTCTACTTGAAATGTAAA
AGTGTAAAAATTTACAAAGGGAGTAACTGCTTTTTGCTTAAGCACAGGGTTGGCACCACT
ACCATGCAGGTCAGACCTGCACATATTTTTGTACGTTCATGTTTCTTGAAGAGTGAGTGG
GGCTTGCAGAGCATGTTTGCTCAATTGAAGTCTTCACATTTTTACAATTTTTTTATTTCT
AACATGAGTTAACATTCTT
