Microarray Probes on PGSC0003DMT400007895
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_36090_PI426222305 |
JHI_St_60k_v1 |
GGGATTAGGGAAATATTTATGTTAACAATACAAGGTGCCAACTAATTTTTGGCTAGGGAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400007895
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400007895 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G11660.1 |
+3 |
6e-94 |
294 |
177/331 (53%) |
winged-helix DNA-binding transcription factor family protein | chr4:7043006-7044227 FORWARD LENGTH=377 |
Transcript Sequence (1573 bp)
>PGSC0003DMT400007895 1573 pgsc_dm_v3.4
CTCCATCAAAATATTTTCTTTATTAGCCATTTGTTCTTTCTCCCTCCTATCCTACTCTCC
TCTTAAGAAACTTCTAGAAACAAAAAAACGCAAATTTCTCAATTTTCTCGTCTTCTCGAT
CTGTTTAGAAGAGGTTTGGATCTGAATTAGCAGCAACGGTGGAAGCCATGGTGCCATCGT
CTATTGAACATTCCGGCGAATCTGCCTCCGGGGAGAATCAGAGATCTCTTCCGACGCCAT
TTCTGACGAAAACTTACCAGCTTGTAGATGATTCTGCCATGGATGAGTTGATCTCGTGGA
ATGACGATGGAACGACATTCATTGTTTGGAAACCTGCTGAGTTTGCTAGGGATTTGCTTC
CGAAATATTTTAAGCATAATAATTTTTCCAGTTTTGTTCGGCAGCTTAATACTTACGGAT
TCAGAAAAATTGTACCTGATCGATGGGAATTCGCAAATGACTGTTTCCGTAGGGGTGAGA
AAGGACTACTTCGTGACATTCAACGCCGGAAAATCTCACCGGCATGTACCGTCGTGAGTG
CGGTTGTTGCACCAGCAGTAGCGGTGAATGCAGCACAAGCAGTGACGGTAGCGGTAGCAC
CGGCTGTGAGGATGGTTTCTTCGTCGAATTCCGGTGATGAACAGGTGTTATCATCCAACT
CATCGCCTGCAGCTACGGCAGCGGCGATGTTAAGGACCACCACGTGTACGACGACGCAGG
AACTTATAGAGGAGAACGAGCGGTTGAGAAAGGAGAACGCGCAACTGAATCAGGAATTGA
ATCGGTTGAGAAGTTTATGCAATAACGTATACAATCTGATGTCCAATTACTCGGTGAATC
CGGCGGATATACCGGCAAGAATACCGGAAGGACGAGCTCTGGAATTGCTTGACGGCAGCG
GTGCAGCCTTCACAGCGGCGGAGGAAGATATAAGCCCACGGTTGTTTGGTGTATCAATTG
GGGTAAAGCGCGTGAAGAGAAGCAACGAAGAAGAATCTGATACAGTTGAGGATCAGGATC
AAGTACAACCGCATGGATCAGACATGGAATCAGAGCCGTTGGATTCAGGAAGCGCTCATC
ATGATGATCAACCATGGATCTATCGATTAGATTTAGGGTGATGATTTGTCACTCAGAACA
AGTCGGTCCCTTGTAGGTGGGGTCCACAGAAGCACTTGGGTGTTGATGAACAACACGTAT
ACAATGGAAGATTGTTGGTTGTTTCTGGTGGTTTCTAGAAGAAGTGAGAAATTGAGTCCA
ATGGTTTTTAGAAAAGGTCACAATATTAGAAAATTATAAAAGGCCCCAAAAGAGGTGGAA
AAGGAGAAAAAAAGTGGCTTTTTAATATGATTTCATAATTGGATTGGAAAAATAGAGGGA
GCTGAGCTGGTAGGTTAAAAAAGATGATTAGTCAATGTTTTAATTAGTTGGGATTAGGGA
AATATTTATGTTAACAATACAAGGTGCCAACTAATTTTTGGCTAGGGAAATTGTTTGTGC
ATAATTGAAACATTAATAATGTTGTAACTTTATGTTTGAAGTACTTGGTAAATTTACTGA
ATATTTGCTCTTA
