Microarray Probes on PGSC0003DMT400007876
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_36079_PI426222305 |
JHI_St_60k_v1 |
AGATATAATACATGGGGCTCTTCAATTTGAACCACCATTCTGACTTTAGAATGTGTTGTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400007876
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400007876 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G63410.1 |
+1 |
1e-44 |
153 |
79/180 (44%) |
Protein of unknown function (DUF567) | chr1:23510075-23511997 REVERSE LENGTH=208 |
Transcript Sequence (919 bp)
>PGSC0003DMT400007876 919 pgsc_dm_v3.4
CAAAATCTTCTCTCAAGCAATTTCATTTCTTCAAAATTCCAAAGTATATTATAAATTTAA
TTTACTCTAATTATGGGTAAAATTCATCCAGAAAATATATCTTCTCCTTCTTCTTCCTCT
TGTTCATCTCCTTATGTTACATCTAATAGAGAAACATTTACAATATGGATGAAATCACTA
GTTTTTCATGGAAATGGATGTACTGTTTTTAATTCCAAAGGTGAACTTTGTTTTAGAGTT
GATAATTATCAAGAAAGATGTAGCAATGAAGTTTTTCTCATGGATCTAAATGGACAAGTT
CTCTTCTCCATCAAAAAAGAGAAATTAAGAGTTTTTGGTAGATGGAATGGATATTTATGT
GGTGGATTTAAAGGGAGGCCATGGTTTCAAGTGAGAAAAAATTGCACATTTTCAAGAGGA
AATGTGATATGTAATGTGAATTTGGGCAATGAAAAATCAATTGAAAGTTGCTACAAGATT
CAAAAATTGGACAAGAAATCATCATTTAAAGTTACAAATACTACTGGAGAAATTGTTGCT
GAGTTAAAACAAAAGCAATCGTCGAGAGGATTTGCATATGGAGATGATGTGTTAACTCTA
GAAGTGGAACCCCAAGTTGATCAATCGCTAATTATGGCATTAGTGACAGTTTGTGGCTTA
ATTAGTCGCAAATTATGATCAAGAAATTAATTATATGAAGAATTCAAGAAATTAGATATA
ATACATGGGGCTCTTCAATTTGAACCACCATTCTGACTTTAGAATGTGTTGTGTGCATTT
TTATTTTTATTTTTATTTGTAAATTTTTAGGACCAAAAAAAGAGAGGAAATTAAATACTT
TAGTTCGATTTTATTTTCGTTTCTTGTTGTAGAAATGTCGAAATTTTGTGAAAAGAGTAA
TTCAAAAGGGATTAATCTT
