Microarray Probes on PGSC0003DMT400007736
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_4629_PI426222305 |
JHI_St_60k_v1 |
AGTTATGATGACAACTTAGAAGAGATATTTGTGTACATAATTCTTTGGCCTTGGGCTTGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400007736
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400007736 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G42380.1 |
+3 |
4e-35 |
127 |
80/144 (56%) |
calmodulin like 37 | chr5:16942758-16943315 REVERSE LENGTH=185 |
Transcript Sequence (847 bp)
>PGSC0003DMT400007736 847 pgsc_dm_v3.4
CTTTGTTTCAAAGTTCAACCCTTTTATCACTTACTCATTTTCTACTTACATCTAGCATGT
GTAATATGGTGTTAGTTTCTGTTTCCACGGCTGAAAAAGAATCTTTCTTCTCAAGATTAC
GTAATAGGTTTTTCCTAAAAAAGACTAATACTCCTAAGAAGGAACATGAGAGTGTAACAA
CAACAACTATTACTACTACTACTACCACTATTGATCGTTTATCGGTGAGTGATAGTAATA
GTGGCGAGTTAGAGAGGGTATTTACGTACTTTGATGAGAATGGAGATGGAAAGGTGTCAC
CAACGGAGCTAAGGAGATGCATGAAGGCGGTAGGAGGTGAGATGACGGTGGAGGAGGCTG
AGATGGCGGTGAGGCTATCGGATTCAGATGGGGATGGGTTGTTAGGGTTGGAGGATTTTA
CGAAGTTAATGGAAGGAATGGAGGAAGAGAGGAATAAAGAGAGTGAGTTGATGGGAGCAT
TTGGAATGTATGAAATGGAAGGATACATTACTCCTAAGAGCTTGAAGATGATGTTGAGTC
GACTCGGCGAGTCAACCTCCATTGATAAATGCAAGGTTATGATAAGGAGATTTGATATCA
ATGGAGATGGAGTTCTTAGCTTTGATGAGTTCAAAGTTATGATGACAACTTAGAAGAGAT
ATTTGTGTACATAATTCTTTGGCCTTGGGCTTGTTATTGTTATTTTATTTCTTCTTGATT
CTTGAGCTCAAATGTTTCTGGTAATTATGTAAATGGTTTTTGGTTGAGATTTATACATTC
ATAGATTCAAATTTGTAATCAATTCCTTGGTTTACTAACTTGGAGAAGTGTTACTTCAAC
AGTGGAA
