Microarray Probes on PGSC0003DMT400007625
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_4144_PI426222305 |
JHI_St_60k_v1 |
GGTGCAAAGGGAGAATTGGAAAATCTACTCAAAATTGCTCAACTCAAAGCATTTTTAGAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400007625
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400007625 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G46530.1 |
+3 |
4e-18 |
71 |
32/94 (34%) |
NB-ARC domain-containing disease resistance protein | chr3:17130739-17133246 REVERSE LENGTH=835 |
Transcript Sequence (2603 bp)
>PGSC0003DMT400007625 2603 pgsc_dm_v3.4
ACAAGCTAATAGTTGAAAAAAAAAAGAAAAATATCTTTGTTAGATTTGTAATAACCAATT
GAAAGGAGATATGGCAGATGCAGTGGTGAATTTTCTGGTAGAGAATTTGTTGCAGCTATT
GGAGGTGCAAAGGGAGAATTGGAAAATCTACTCAAAATTGCTCAACTCAAAGCATTTTTA
GATGATGCTGCAAAATTCGGATACACGAATAGTGAGCAGTGGAAAGTTTTGGTGATAGAA
ATTCATAAAACTGTGCACAGAGCTGAAGATGCCATTGATAAATTTCTGGTTTAAGCAAAG
CTGCATCAAGATAAAAATACGATGGGAAGGATATTCGATTGGCCACGTAATCTGATTAAA
GTTAGGAATCTTGCTGCTGAGATTAAAGGAATAAATGATCAAGTCAAAGAACTTCGTAGC
AGCAATCAAGCACTTCAGGCCACCCCTGTTATTGAGCACCATAAAAAAGAGGAAGTAACT
CAGGGTCCTTCTTTGGAGAATGATGCAGTGGTCGGGTTTGATGACGAAGCTAATAAAGTG
ATCAAGCGACTTGTTGAAGGACCGATGGACAGTGTGGATATTATCCCAGTTGTGGGAATG
CCCGGACTTGGAAAAACTACACTGGCAAGAAAAATCTATAATGATTCTAAGCTTACAAAT
AAATTTTATAGCATTGTTTGGGTTTACGTCGGTCAGGAATGCAAAGCAAAGGATATTTAT
CTTAGGATTCTTAAATTCTTCAAAAAAACCATAGAAGATCATCTCAATGACGATGTGGAC
ACATTTGGCTAAGGCAATAGGTAGTTATATCAAGAAAGGAGGTAGATGTCTCATTGTTTT
AGATGATGTGTGGGAAGTTGAGTTATGATCATTTGCCCCAAGAAGTGCAGATGTGCTTCT
TGTATTGTGGTGTCTTTCCTCGAGGCTTTGATATCCCTTGTTGGAAATTGATTCGTTTGT
GGATAGCAGAGGGGTTGATAAAGCCGCAGCCTAACTTCACTCTAGAGGAGATAGCAGAGT
TTTGTTTGACAGATCTTCTCAACAGAAATTTAGTAATAATAATGCAAAAGAGGTCTGATG
GTCAAATAAAAACATGTCGTCTTCACGATATGTTGTATCAGTTCTGCAAAAAGGAGGCTA
GTAACAGATGGCTTTTTCAAGAACCTGATCAATCTACCCTGGACCCAGATACTTGCCGTC
AATTGTGTATTCAACCATCTAATCTGTCTGACTTTCTCTCCAAACACCTTTTGCAGAACA
TGTCAGATCTTTCTATTGTTTTTCCTCAAAACAAAAACCAATTGACTTGTCTCCTAATGA
AATCAAACTCATTCACAAAGCCTTTCCACTTATGAGAGTCTTGGATGTTGAATCTCTCAA
GTTTATTTTCTCCAAAGACTTCAACCAATTATTTCATTTGAGGTATATTGCTATCTCAGG
TGACTTTAAGGCCCTCCCTCCTACCTTTGGTAAATTCTGGAATTTACAAACTCTAATACT
TAATACAAGTACCTTAGAGCCCACTCTTGAAGTAAAAGCAGAAATATGGAACTTGTTACA
GTTGAGGCATCTCCACACCAACATACCTGCAAAATTGCCATCCCCGACTACCACCACAGG
TAAACCTTCTTGTCTACAGACTCTTTCTATGGTTGCGCCAGAAAGTTGTGAGAAAGATGT
GCTAGCAAAGGCCTGTAATGTAAGAAAATTGAGCATTCAAGGGCAAATGGCGGCTTTTCT
TGGTGCTTACAAGGGTGGTATCAACAATCTTGAAGAGCTACAGTGTCTGGAACATTTGAA
ATTGTTGAATGATGTTCTTTTCATAAATAAAACACTTCACCTTCCACTAGCATTCTCCAA
ACTGGTACGTACGGTGAAGAAGTTGACTCTGACAAACACAAGGTTTGCTTGGAGTGAGGC
GGATAAATTGGGGGACGTTTGGAATCTCTTTGAGGTCCTAAAGTTTAAGAAAATGCATTC
ACGGGTGATCTCTGGAAGCCAAAGAGTGGATTTAGCGCACTCCAAGTCTTGTGGATTGAA
AGGTCAGAATTAGAATCTTGGGAGGCTTCGGTTATTAACTTCCCCGTGCTTAGGCAACTT
GTTCTTATCTCTTGTGATGAGCTCGATGCTGTGCCACTTGAGCTGGCTGATATACTTAGC
CTTCAAGAGATGAGACTTGAGAACACAAGCAAAGCAGTAAAATCCGCAAAAAGTGTTCGG
GATAGCAAGACATCTAAAGCATGGAACTCAAGCTAAGCATATTCCCTCCTGAAAATGAAT
CCAAGGTTCCACAGTGATATAAAAGGAGAGAACTTGGACATTGAGTTTGCTGGAAGCCAG
AGCTCATCAGACAAATAACTGGAGTAGTGTGATTTTGAAATAAGGCTAGTTCTGCTGCAT
CTCGAGTTCCCCTTTATGTAAATTGTTTTTTTTTCTTGGTTGTGAAACTGTTTGCATCTT
TCCTATTCTGTTATCTTTGTATTTGCTTTGTTTCATTTGTGTAAAACTGTTGTTTGCATC
TTTCCTATTCTGTTATCTTTGTATTTGCTTTGTTTCATTCGTGTAAAACTGTTGTTTTAA
TCTATCATTGTTTTTGTTGAAAG
