Microarray Probes on PGSC0003DMT400007545
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_13200_PI426222305 |
JHI_St_60k_v1 |
TGTTGTTGTGCCTGTTATTCTAGGGGCTTGGCCATTACAACCTTACCTAGGTTGTTTTTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400007545
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400007545 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G25490.1 |
+1 |
0.0 |
635 |
354/643 (55%) |
EIN3-binding F box protein 1 | chr2:10848018-10850275 REVERSE LENGTH=628 |
Transcript Sequence (2791 bp)
>PGSC0003DMT400007545 2791 pgsc_dm_v3.4
AAAAAAGAACCATTCTTTGTTTCTTCTCTCTCTAACCTCAAATCTTTCTCTCTCTATTTT
TGCCCTACTTTGTTGGGGTTCTTGAAAAAAAACTGGATTTTTGAGGGTTCTTGAAAAAAT
TTGGATTTTTTCATCTGGAATGCAAATCTTGGTTAAAGATATAATCTGGGTTGTGTTTTT
CTTGGTTCAAAATCTGATCTTTTTTGCTTTACAGTTCGGGATTTCTTCTGAAGAACAGAC
ATGCCTACTCTTGTTAATTACAGTGGTGATGATGAGTTCTATTCTGGTGGATCGTTTTGT
TCTGCAGATTTGGGTCTCATGTTGTCTTTGGGTCATGCTGATGTTTACTGTCCTCCTAGG
AAGAGGGCACGCATTAGTGGCCCGTTTGTTGTCGAAGACCGGTCAAAGGATCCATCTCTT
GAAATTCTTCCTGATGAATGCCTATTTGAGATCCTCAGACGATTGCCCGGTGGCCGAGAA
AGGGGTGCAGCAGCTTGTGTTTCTAAGCGCTGGCTTACAGTGTTGAGTAGCGTGAGGAAC
TCTGAAATCTGCAGGAGCAAGAGCTATAACAATCTAAATGACGCAATAATGATCTCTAAA
GATGAAGATCTTGAAGTTGAATGTGATGGATACCTTACTAGGTGTGTGGAAGGGAAGAAA
GCTACTGATGTTAGACTTGCTGCAATTGCAGTTGGGACGTCTACCCGTGGTGGACTAGGA
AAGCTTTCTATCCGAGGGAGTAACTCAGTTCGTGGTATTACTAATGTCGGTCTATCTGCT
ATTGCACATGGGTGCCCTTCTCTTAGGGTCCTATCATTGTGGAATGTTCCTTCTATTGGG
GATGAAGGTCTCTTGGAGGTTGCAAGGGAATGCCGTTCATTAGAAAAGCTAGATCTGAGC
CACTGTCGTTCAATCTCCAACAAGGGTCTTGTTGCAATAGCAGAGAATTGCCCGAGCTTG
ACTTCATTGACTATTGAATCCTGTCCAAAGATTGGAAACGAAGGCTTGCAAGCTATTGGA
AGATGCTGCACCAAACTACAGTCTCTTACGATTAAGGACTGCCCACTTGTTGGAGATCAG
GGAGTTGCTAGTCTTCTGTCATCAGGTGCTTCAATGTTGTCAAAAGTGAAACTACATGGT
CTAAACATCACAGATTTCTCGCTTGCTGTCATTGGTCACTATGGCAAGCTGATTACCAAT
CTTAATCTTTGTTCACTTCGTAATGTGAGTCAGAAGGGATTTTGGGTCATGGGTAATGCT
CAAGGCCTCCAGTCTCTGGTTTCTTTGACAATCACCTTATGCCAGGGAGCCACTGATGTC
GGTCTTGAAGCTGTTGGAAAGGGATGCCCAAATCTCAAACATATGTGCATTCGCAAGTGT
TGCTTTGTTTCTGACGGTGGGCTTGTTGCTTTCGCTAAAGAGGCTGGATCTCTTGAGAGT
TTGATCTTGGAGGAGTGCAACAGAATTACCCAAGTAGGTATCCTTAATGCAGTTTCAAAC
TGCAGGAAGTTAAAGTCTCTTTCCCTAGTGAAGTGCATGGGAATCAAGGATCTAGCTCTA
CAAACTTCCATGCTGTCTCCATGTGAATCTCTTCGGTCCTTGTCTATCCGAAGCTGTCCA
GGATTCGGGAGCACTAGCTTAGCTATGGTCGGTAAGCTCTGCCCCAAGCTGCATCAATTA
GATCTCAGTGGGCTTTGTGGAATAACCGATGCTGGTCTTCTCCCACTCTTGGAGAACTGT
GAAGGACTTGTTAAGGTGAATCTTAGCGACTGCCTGAACTTGACAGACCAAGTGGTGCTT
TCATTGGCTACGCGACATGGAGAGACCCTTGAATTGTTGAATCTCGATGGATGCAGGAAG
GTTACCGACGCAAGTTTAGTGGCAATTGCAGATTATTGCCCATTACTTAATGATCTTGAT
GTTTCTAAGTGTGCAATAACTGATTCTGGTGTAGCTGCTTTATCCCGTGGAGTGCAAGTG
AATTTGCAGGTCCTTTCTTTATCAGGTTGCTCCATGGTATCAAACAAGAGTGTCCCTTCT
CTTAAAAAGTTAGGAGAGAATCTACTCGGCTTGAATCTCCAACATTGCTCTGTTAGTTGC
AGCTCAGTCGAGCTTCTTGTGGAGGATTTGTGGAGGTGTGACATCCTCTCCTAAACCAAA
AGGGCACAAGGAAATGCATCAAAATGGTCAAAAAGAATAAGCAGAAAGCTATAATGGTTC
ATTCAGCCTGGCAATTACAGAAGCAAACATGAGTGTTCTTTTTTTAGCCCGTATATTCGT
GGTTATCTAATACTTCAGTGTCTCGGTTGTTTTCCAGGAGGCTATGGCATCACTTTTTTC
CTCCATTTTTTGCAGGCTTCGTCAAATCGAAGCCTGTTTCATCCATTTTTGGAGACAACT
CCATCATGCCATGGTTTCCTGAGAATACAGTCACCTAGTACTGAGATTAAAATTTTCACT
CATGTTGCTCCTCGAAAGAATCAGGCCGTTTGAATCATTCAGCTACAACATCGACAGACA
ATATCTATCGATAGTCTTTTAGTGTTTCATTGTAAGTATTCTACTGTGTGTCTTTTAGAC
TTTAGTTGCTTTGAGCAAATTTCTGTTGTTGTTGTGCCTGTTATTCTAGGGGCTTGGCCA
TTACAACCTTACCTAGGTTGTTTTTTTTAACCAGTCCCTTGTTTTTTGATAGGATTATCA
ATTTCCTATTTTTTACCAGGTTCCACATATTCAGATTTGTACTCTTGCAACTATGTTTTA
CATATATAATGAAGTACTAGTTTGTTTTGAA
