Microarray Probes on PGSC0003DMT400006971
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_5799_PI426222305 |
JHI_St_60k_v1 |
GGCCAACAAAAAAGTGGCTACTCTTTGCAAGCTTTTGCTTACAATGAAAGCTTAGTTTCA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400006971
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400006971 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G10240.1 |
+1 |
9e-18 |
84 |
97/398 (24%) |
F-box and associated interaction domains-containing protein | chr3:3166698-3167867 FORWARD LENGTH=389 |
Transcript Sequence (1233 bp)
>PGSC0003DMT400006971 1233 pgsc_dm_v3.4
CGATATCTTCATAATAATTTCTTCTTCTTTTTCCCTTATTCTTTATTTTCTAGAAGGATT
TGAAGGTTAAAAAAAATGGAGCAAAAATCATATTTTAGTGATTTACCAGAAGATATAGTG
ATGGAGATTTTGTCAAGATTGCCTGTGAAATGTCTCTTACAACTCAAGTGTGTCAACAAA
AAATGGTATGTTTTAATTGAAAATCCAATTTTTATTCGAAAACACCTTCACAACACAAAA
AATCATACAAGTTATTTTGTTCATCATTATTTTCTTGATACAATGAAATCTGGTTTTACT
TTATTTCATCATGATGAACAAAACCAATTAATTCCAAAATCCCATTTGTACCAAGATGTT
TTAAACACATCTACACATTTGTGGCAAGTTCTTAGTCCATTAAATGGTTTATTTTTGCTT
TATAATGATCGAGAAGATGTAGCACTATGGAACCCTTCTACTAAAGAATTTAAGCCTCTA
CCAAATTCACAACCCCTAAATTGTCCTTTATATATGTTGTCTTCATATAAATTCGGTTTC
GGAATCGAGCCCTCGAGTGGTGACTATAAAGTCGTTTGGATGAGAGATTATTGGGACGTA
GACTCTGAAGACTGGCATTCTCCTACGATTATTTCAGTCTATACATTGAGTATGAATTCC
TGGAGAACTTTTGAGGAATTCAGTGTTTCTAGTCGCGACTTGGTCAAGTCAAACGGTAAA
ACATATTTGAATGGATTTTACTATTGGAGGGCATGCCAAAATGATAAAATCTTTGCATTT
GATATGAACAATGACAAAATTGTTGAAATTCAAACACCAAAGTCATTTGTATCTAAACAA
GGGGACTTATCATTGTTTAATGATTTCATTGCTATGTATATTTATGAGCCAATAATTCTT
GGCAGAGAAACAAGTATTGACATATGGATTATGGAGAAAAATGGCTATTGGACTAAAAAT
GTGAGAATTGGCCCTTTTTTAAATATTAAAAGATCACTTGGATATGGAAATAATGGGGAA
ATTTTTCTTGAAGTTGTTACATGTCAATTGGACATATTTGATCCTTTTTTAAATAAAAAT
AGAGTTCTTGGCCAACAAAAAAGTGGCTACTCTTTGCAAGCTTTTGCTTACAATGAAAGC
TTAGTTTCATTGAAAAATAATTGCATCTTGTAATGTAGTTGGTTGATAATAAATGACAAT
GATGGCTATGATTTAAATTCTACTTTTTAGTCC
