Microarray Probes on PGSC0003DMT400006957
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_5783_PI426222305 |
JHI_St_60k_v1 |
TCTCGGTTAGGACCAAATTGGAAATAAAAGGAAAATATTGGGGTTGTTTGGTTCCACAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400006957
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400006957 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G36320.1 |
+3 |
2e-49 |
165 |
84/163 (52%) |
A20/AN1-like zinc finger family protein | chr2:15229388-15229873 FORWARD LENGTH=161 |
Transcript Sequence (1020 bp)
>PGSC0003DMT400006957 1020 pgsc_dm_v3.4
CTTTCTATAAATCATCCTTCTCCCTATTTTCAAGATTCTTCATTCACCTTTTTTTTTTTT
CATTTTTCTCTCCATTTTTCTTCAATTTTCCAACACCCTTTTGCTTTAATTACAAACCCA
TAATTTATTTTCATAAAAAAATCAATCGAAAAAAAAATATTTCTATGGCGGAAGAACACG
AATTTCAATCCCCAGAAGGTGGGCGTCACCAATTATGTGCTAATAATTGTGGTTTTTTCG
GCAACTCTACCACCGAAAATTATTGTTCCAAATGTTATCGAGATATCGAAGAGCGAAAAT
CCGATGCAAAATCAATCGACTGTCTATTTTCTCCGACAAAAAGGGTGTTGGAGAAAATGA
TAGTCAAGCCGATTGTTTTGACGCCGGATTTAGTGGAGGCTGCGGTGCCACTTGTGACAC
CGCAGCCGAATAGGTGTTTGGTTTGTAAGAAGAAAATGGGGTTAATGGGATTTAAGTGTA
GGTGTGGGACCATTTTCTGTGGGACCCATAGGTATCCAGAGGTTCATGCATGCACATTTG
ATTTTAAGTCAATGGGGAGAGAAGCTATAGCTAAGGCAAATCCATTGATCAAAGCTGAGA
AATTGAAGAAGATCTAATCTTAGCCGTTGGATTAGATGACTTTTTCTTTGGTGCCAAAAA
TGAATGAGATCGTCGTGATGATGATGATGGCAGTGGTGGTGGTTCTCGGTTAGGACCAAA
TTGGAAATAAAAGGAAAATATTGGGGTTGTTTGGTTCCACAAAAAAGTTATGTGAATGTA
AAATGTATATTTATATTTCGATTTTCTTTTTTAGTATTAATCCTTTTAGTCTGGGAAATA
ATTTATGTTACATGGCTTGCTTTGTTAAAAAAAGACTTGAATTTCGCTCTATTTTATTAT
TATTATTATTTACTTTCATGGGTTATTGGTTGAAATAATTCATGAAAAGTAGTAGGGGAA
GAAAAGGTTTAATTGATCAACAAATGATGACAAATTAATAATATTTGGTGTGGGACTTTT
