Microarray Probes on PGSC0003DMT400006155
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_24977_PI426222305 |
JHI_St_60k_v1 |
CCTCGATCCAAAACCCTAATTTTAACTTCATGAATATGGGAGGAAATAACTTACCTTTCA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400006155
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400006155 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G46880.1 |
+3 |
0.0 |
827 |
448/757 (59%) |
homeobox-7 | chr5:19031540-19035388 FORWARD LENGTH=826 |
Transcript Sequence (3044 bp)
>PGSC0003DMT400006155 3044 pgsc_dm_v3.4
CGATGGGGATGGGAGGAAATAATAATAATAATAATAATAATGTTTCTTCCGATACACTCT
ACTCTTCCTCGATCCAAAACCCTAATTTTAACTTCATGAATATGGGAGGAAATAACTTAC
CTTTCAACATTTTTCCTCCTAATATCATTCCAAAGGAAGAAAATGGATTATTCAAAAGCA
AAGAAGAAATGGATAGTGGTTCAGGAAGTGAACATATTGAAGGAATGTCTGGAAATGAAC
TCGAACCCGAACAGCAACAACAACAACAACAACAAGCGGGGAAGAAGAAACGTTATCATA
GACACACTGTTCGTCAGATCCAAGAAATGGAAGCGTTATTTAAGGAATGTCCACATCCAG
ATGACAAGCAAAGGCTTAAACTAAGCCAAGACCTTGGCCTTAAACCACGTCAAGTCAAAT
TCTGGTTTCAAAATCGAAGAACTCAAATGAAGGCTCAACAAGACCGATCAGATAATGTGA
TACTTAGAGCTGAGAATGACAATTTAAAGAATGAGAATTATCGCCTGCAAGCAGCTCTAC
GCAGTATTATGTGCCCTACTTGTGGAGGTCCTGCCATGCTTGGAGAAATGGGATATGATG
AACAACAACTCCGTCTCGAAAATGCCCGTCTCAAAGAAGAGTTTGAGCGAGTATGTTGCC
TTGTATCTCAATACAATGGCCGCGGACCACCAAATCCACTTCTTCCACCATCATTGGAAC
TCGATATGTCGATTAATAATTTCTCAAGTAAATTTGAGGACCAGCCAAACTGCGTGGATA
TGGTTCCTGTTCCATTACTCATGCCTGATCAAAACAACACTCAATTCTCCGGTGGTCCAA
TGATCTTGGAAGAAGAAAAATCTCTTGCTATGGAACTCGCTCTTTCATCTATGGATGAAT
TAGTCAAGATGTGCACAAGCTCTGACCCGCTCTGGATTAGGGCTTCTAATGATTCTGGAA
AAGAAGTGCTTAATGTTGAAGAATATTCTAGAATGTTCCCATGGCCTGTTGGAGTCAAGC
ATAATGGCAATGAGCTTAAAATTGAAGCAACTCGTAGCAGCGCTGTTGTTATTATGAATA
GCATCACTCTCGTTGATGCCTTCTTGGATACAAATAAATGTATAGAGCTTTTTCCATCTA
TCATTTCTAGAGCCAAAACAATTCAAGTTGTAACTTCAGGAGTTTCTGGACATGCCAGTG
GTTCTCTTCAATTGATGTTTATGGAAATGCAAGTTTTGACACCCTTAGTGTCAACAAGAG
AATGTTATTTCCTGCGTTATTGCCAACAAAATGTGGAGGAAGGGAGTTGGGCAATTGTTG
ATTTTCCACTTGATAGTCTTCACAACAATTTCCCACCACCTTTCCCTTATTTCAAGAGAA
GACCTTCTGGATGCATCATTCAAGACATGCCCAATGGATACTCAAGGGTTACATGGGTTG
AACATGCTGAGGTGGAGGAAAATCCAGTGAATCAAATATTTAATCACTTTGTAACAAGTG
GAGTGGCATTTGGAGCACAAAGATGGTTATCAATCTTGCAAAGACAATGTGAAAGGCTTG
CTAGTCTTATGGCTAGAAATATATCTGACCTTGGAGTGATACCATCTCCAGAAGCGCGAA
AGAGCTTGATGAATTTGGCACAAAGGATGATCAAGACATTTTGTATGAACATAAGTACTT
GTTGTGGTCAATCATGGACAGCTCTTTCTGATTCTCCTGATGATACTGTTAGAATCACTA
CTAGAAAAGTTACGGAACCAGGACAACCTAATGGACTAATTCTTAGCGCGGTTTCAACTT
CTTGGCTTCCATATAATCATTTCCAGGTCTTTGATCTCTTGAGAGATGAACGTCGAAGAG
CTCAGTTGGATGTACTTTCAAATGGGAACTCATTACATGAAGTGGCTCATATTGCAAATG
GTTCACATCCAGGGAATTGCATTTCTCTTCTTCGAATTAATGTGGCTAGTAATTCATCCC
AAAGTGTAGAGCTAATGCTACAAGAGAGTTGCACGGATGATTCAGGCAGCCTAGTGGTCT
ACACCACTGTAGACGTGGACGCGATCCAACTAGCCATGAACGGGGAGGATCCATCGTGCA
TCCCTCTTCTTCCCTTAGGGTTTGTCATAACACCAATCAATAACGGACAAGCCAATATTA
ACAACTGTGACAACAACGTCTCAGGTATTGAGGCTAATTCATCTCAATCTTCCGAAAAGA
GGCAGAACTTGTCGTCAATTCAAGAGTATTCAGGAGGTTGCCTACTCACTGTTGGATTAC
AAGTCCTCGCTAGCACGATCCCAAGTGCAAAGCTCAATCTCTCTAGCGTCACTGCTATTA
ACCATCATTTATGCAACACTGTACAACAAATCAATGCTGCACTTGTTGCTTTTTACCCCG
ACATAGAGATAACTGCACCATCATCACCACCACCACAACAACCAGAGTCGTCCAAGCAAG
TGGACGAAAACTCAAATTCCTAATTACCCAAAACCTCCCTCTAACAAATTTTTTTTTGTA
AGGGGAGGTTATGAGTAATTTGTGAAAAATGAGAAGCCAGGGTAAGGGGTAGGACTACTA
TAGTACTATTTTGGCATAGTAGGGAAGTGGGTCCCCATGCAAATGAAGGTTTTAATAGCC
TGTACATTTTGCATGGGTGGACCCCTAGTAAATAAATGACAAGATCAGAAAGTGGTTGTT
AGGTAGGTGGGAAAATCCAGTGAAATGATTGTTTATGTGTGTGTGTTTTTTGAATATTTT
GTTGTGATTATGATTTTTGGGAAGTCAAGAACGAACCAGGTGACAGGTGAAAATGAAAAT
CGTTAGTGAATGGTGAGAAAATTACCCCTACAAATTAAAAAAAGACTATGGTTCGGGTAT
TGACTTCTTTTGTTTTATGTCCCTCTACTCCCTCCTACTAGTGATTAATTTTTTGTGTTG
TTGATCGATCAGAAGAATTACAATTTGCAGTTGTTTCTGCAATGGACTCTGATTGTAGTA
AGGTTTAATTACTAATTAGTAGTTGTTTTATATCTATATATCCT
