Microarray Probes on PGSC0003DMT400006041
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_38436_PI426222305 |
JHI_St_60k_v1 |
CTTCTGCAGTGTTTCAATGTAGTAGTAATGCTTTACCTGGACTAAATGAGATGCATAATT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400006041
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400006041 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G27950.1 |
+1 |
3e-62 |
213 |
156/385 (41%) |
cytokinin response factor 4 | chr4:13909732-13910739 REVERSE LENGTH=335 |
Transcript Sequence (1986 bp)
>PGSC0003DMT400006041 1986 pgsc_dm_v3.4
CGGATCCTATAAAAGAGGTAACCAAGGCGTTGTAGTCTCACGGACTTGAAGAAACACAAC
TCTGTCTCTCCACAAACTCAACTTTCTCTTTCATTCATCACACAAAGAACAACACTTCAT
CACTAGCAAGTATTTCTTGAGAAACATAGGATTACGAGTTTTTGATTCCTTCTCTTTTTT
TAGACCATATGGTATTTCCCTTTATTGTCCACTCAGCCTTTTTAAGCCTCACGCTTACAC
TAAATCCTTTTTAGCCCTTCTTTCTTTCTTGTTTCCTTTGAGGTTCACTTTGTTAAAAGG
GTTTTGCTTTGTTATCACCTTCAAAACTTTGTGCTCCGTTTCTGTGAAGCTTGTGGTGCT
GGTTTACTTTCTTCTTTTCTTTTTGCCCCCTTTAACACTATATATTCCATCTTTTAACGA
AACTTGCTCCTCTTTTTGTCAGATGTCTTTGGTTCTCTCCTTATGTTTCAAGCTTCTCTT
TGACTATTCCTTTCCTTTTTAATCCCTTTGTGCCACTCTCAAAACAATCTCATCCTTATT
TTCATTTCAGCAACCACACTTCACTCACCATTTTTTAGTTAAAAAATGGATCATCACAAT
ATGCTTTGTCCGGTCAAATATACCGAACACAAGAGAACAATCAGAAAAGTTACTAATATA
AAGCCGCTTAAGAAGGTAGCGGATGTCCGGAAATCCTCGGAGTATAATCCTACTATTCCG
AGGACTGTACGGATATCTGTTACTGATCCAGATGCAACTGACTCTTCAAGTGATGAAGAA
GAGCTTTTTGGGCGGAAACGTGTGAAAAGATACATTAGTGAAATCAGTATTGAGATGCAA
TCAATTAATGATGTTAAAACTGTGAGTACTAGTAATGGCAAGAAGCGAGTAGCTGAAGCT
TCACAAGCGAAGCAGAAGGCGTTGAAAGGGAAGGAAGTGGTGCAGCTACCGGCTGATGGA
ACTGTTAGGAAGTTCAGGGGAGTGCGTCAACGGCCGTGGGGGAAATGGGCTGCTGAAATC
AGAGACCCAGCGCGTCGCGTTAGGCTCTGGTTAGGTACTTATGATACTGCTGAAGAAGCT
GCTATGGTTTATGACAATGCAGCTATTAAGCTCCGTGGACCAGATGCTTTAACAAATTTC
ATTACTCCTCCAATGAAGGAGAATCCGGAAGTCAATGTGGCTTCGAATTCGGGCTACGAA
TCTGGTGATGAATCACACAATCTTTCTTCTCCCACCTCTGTTTTGCGGTTCAGAACTAGT
CAATCCAGTGAAGAAGCAGAGCAACAAAGCGTGTCTGGGTCCGAACCAATTCTCGAAGAA
ACAAAAGTGGAAGAAAATTGCACAATATTGGTGGAACAACCAAACAGTGAGCAAAACGTC
GAACACCTTGAGTGCCAGGGCGAGACACTTACAGTCATACCAGACTATTCAAATGAGTAC
TTACCAACAGACGTTTCCTTCTTAGACGATTTTTTCAACTTTGCAGATGCAGAACAAACA
CTATTTAACGACACAACAAGTTTCACCAATGATGATTTGTTGACGCCATCCAAATACGTA
CCGTCTTGGGATTTCACCAATGACTTTGTATTAGATCCTGAGATTTGCAAATTTGATGAT
TCATTTCTAGACTTGGGTGCATTAGAAGTGGATAATTATTTCAAAGACATTGGAGATTTT
TCCAGTGTTGATGTTCTAATGGCATTATAATTTATCCTTCTCAAAACTACCATTCATTGT
CTCCAGATTGCCAGAGCTATTGGCAAATTTTGTCTACCGGCGACAATGTGAAATCGACTA
GTATATTAGAGTTGTTTGTTTTAGATTCTCCGTTTAAGTTAACGGAGTCAAATAGTAGAT
TGTTATTTTGTTATTGTTTTGATAATAAGTAGTGAGGCCCCCTCCTTCTGCAGTGTTTCA
ATGTAGTAGTAATGCTTTACCTGGACTAAATGAGATGCATAATTTTTACTGAAATTTGTG
TTGCTC
