Microarray Probes on PGSC0003DMT400005709
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_37843_PI426222305 |
JHI_St_60k_v1 |
CTAACTGTACAGTGTTAGGAAGGGAAGAATTAAAAGTGTCATAAATACATGCCTTGTCAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400005709
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400005709 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G25810.1 |
+1 |
9e-52 |
173 |
104/167 (62%) |
Integrase-type DNA-binding superfamily protein | chr5:8986976-8987632 REVERSE LENGTH=218 |
Transcript Sequence (1009 bp)
>PGSC0003DMT400005709 1009 pgsc_dm_v3.4
GGGACATATTGAAAGAAGTTAATATTCTATTCCAAAGTAAAATTCTTCTTCCTTCTTTAT
GTTTGCGTAAAGATGAATTCAGTAGCAGCTCAAGATAATAATGAAATTATTAGTAACAAC
AAGTCGATAAAGAGGAATCGCGATAGCAGCAAGCATCCAGTTTTTAGAGGAGTTCGAATG
AGGAATTGGGGAAAATGGGTGTCAGAAATTCGCGAGCCACGTAAGAAATCACGTATTTGG
CTTGGGACTTTTCCAAATCCAGAAATGGCAGCTAGAGCTCATGACGTGGCAGCGTTAAGC
ATAAAAGGTAATTCAGCTATACTCAACTTTCCTGAACTAGCTGGTTTGCTTCCTAGACCG
GCTACACTTAGCCCGCGTGACATTCAAGCAGCCGCAGCAAAAGCCGCAGCTATGGACAAG
TTTGATAATAATAATGGTATTACTTCGCCGAATAATTCAATTTCATCAAATATGTCCACA
TCTTCATCTTTATCATCGCTGGTATCTGCAATAGATTTGGCGACATCAGAAGAATTGACG
CAAATAATTGAGTTGCCCAGACTAGGAACATCTTTTTTCGGGGATGAATTGAAGAATGAT
TTTGTTTTTGCGGATATGGAAACAGGTTGGTTATATCCTGACGATGGGGGAATGATTTCT
AGCTGTTTTGAGCCTTCTTTGTTATGGAATTACTAATTATAACTATTTAATTAAGTGTCT
GGTGGAATCGGAACTTGTGGAAACCTCCCTGCCTGCTCGAAGAAGAAGTAAAAATCTTCT
TCAGGAATTTGTGTGGACTATGGATTTTTCTTCTCTCTTTTTTTTGGTGGTTGTATAAAA
GAAAGTTTTAGCCTTTTCTTCAATTTTTCTGTAGAGGGGCTAAAAAGACTTTTCATTCCC
TTTTTGTGTAACTTTCTGTATTTCTACTTTTTTTTTAAATAAATAAATCTAACTGTACAG
TGTTAGGAAGGGAAGAATTAAAAGTGTCATAAATACATGCCTTGTCAAT
