Microarray Probes on PGSC0003DMT400005624
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_30027_PI426222305 |
JHI_St_60k_v1 |
AAATATCTTCTTTGTAATGGTTACTGTGAGAAGTTTTGAATCCATCTGTACATGCTGGAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400005624
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400005624 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G56750.1 |
+1 |
2e-42 |
115 |
56/68 (82%) |
N-MYC downregulated-like 1 | chr5:22957986-22960606 FORWARD LENGTH=346 |
Transcript Sequence (1686 bp)
>PGSC0003DMT400005624 1686 pgsc_dm_v3.4
AAATTATGATTCTTGCTCCTCTAGATGACCTGAAATTACGGTGTCTTGCATCTTATTGTG
CAATATGGCAGGTGATGACAAATCTGCTTTACTTTTGTGGCATGTGTACTTTGGTGAAGG
AGTTACTGCTGTTGCGGTACTTTAGCAAGGAAGTCCGCGGCAGTGTTGAAGTTCCAGAAT
CGGATGTAGTTCAAGCATGCCGAAGATTGCTAGGTGAGAGACAGAGTCCAAATGTATTGC
GGTTGCTCGAAGCTATCAATGAGTAAGTCCTTCAGCAAAAAGACATTTCAGGGTATCTCT
GCTGTTTACTTCTCTTCTTCTCCTCATTTCTTCTTGTTTGTTGTGGGGAGCAGTACTTTT
CACCTTAAGTAGGTGGGTTGGGTCTTGAGTGGTTCTCCCTCTCTCTCAACACTAATAGGA
TGCTGCTCAAAGCTCAGTATAGCATAAGGTTGCTACTACAGTGGCTGTATAGAATTTTAG
AACAACCATGTATCTGTTAACCTATGATAAACAAAGAAGTCATTCTACCAAGTCTAGCTT
TGGGTGGAGGCCCTATGTTGCTCGGACTCTTCAAAAGTGCCAACGGGTGCGTGTCGGATT
CGCCAAAAGTAGTGTATTTTTGGAGAATCCGAGACGGGTGCGGCATCAAAAGTGAAGAGT
CCGCGCAGATAGTAAATTTCCTTCTTCTCTAGAGCATTGGAGTTTGACCGAGGGATTTTT
CCATCCATGCCATGGACCTACTTCACTGGTCAGTTCCTTTTTTTGATACTCTTTTTCCTT
TTTTGGTCGATGACCAAGAAATAGGTCTGTGGCCAACCCTTAGGACTAATCGTAGCCTTT
AGAACTAGGGGATAATAGGCTAGCTTCTATCCTTCTTCACTTAAATACCTAACTTAGTTC
CATGTTTTGATACATATATTGAGTAAATTTGTTTTATTTATCTGACAGGAGACCAGACAT
AACCCAAGGCTTGCGGAAACTAAAATGTCGTTCTTTAATATTTGTTGGAGAGAGCTCTCC
TTTTCATTCCGAGGCTCTCCATATGACATCAAAGTTAGATAGAAGGTTCAGCGCTCTAGT
TGAGGTTTGTGCCAAACTTGTTTCACTCTTGTCATGCTAGTGAAGGATTGGATTATAAGG
TAATAAGTGGTGTGTGTTATTCAGGTTCAAGCATGTGGTTCAATGGTGACTGAAGAGCAG
CCAGATGCAATGTTGATCCCACTGGAATACTTTCTAATGGGATTTGGATTTTATCGACCG
TCTCAGTGCAATGTCAGCCCAAGAAGCCCGTTAAGTCCAACCAGCATCTCTCCGGAGCTT
TTCTCGCCAGAAAGTATGGGGTTGAAGTTAAAACCAATTAAAACCAGATTTTCTGAAGAA
GTATGAGTCTGGGCTCAAAGTTAAAATAAGTTTTTGTAAAATTTGTAAGCATACATTGAA
GATCCACTTTGATTGAAGACAGTTAGGAATGTGAATTTATAGGAGGGAGGGAGGGTTGTA
GATAAGAGAGTTGGAAAATAGAAAGTGGAAGAAAAAACAAAAGGAAAAAAGAGTTTTTTT
TTTAAAAATATCTTCTTTGTAATGGTTACTGTGAGAAGTTTTGAATCCATCTGTACATGC
TGGACAATAAATAATAGTAATTTATATTGATAAAAGGAATAAAAATAATAAAAAGGCAGG
TGCCAG
