Microarray Probes on PGSC0003DMT400005182
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_47636_PI426222305 |
JHI_St_60k_v1 |
GCACCTACCGCTAGACAATTACCACCTTACTAAAATCGTATTCAGAATGTGAAGTTTACA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400005182
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400005182 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G49700.1 |
+3 |
1e-42 |
152 |
132/286 (46%) |
Predicted AT-hook DNA-binding family protein | chr5:20192599-20193429 FORWARD LENGTH=276 |
Transcript Sequence (1068 bp)
>PGSC0003DMT400005182 1068 pgsc_dm_v3.4
TTTTTTTTCTTTTTTACTATAATATCTATTTTAATTTCTATATTTAGAGAGACAAAAAGA
AATAAGTACTTTTTATTGATAAGAAAATGAAAGAAAAATATGTAGAAGAAAGAAAAAACC
ACTCTAACAATATCTATACGTTTGCTAAACTTCATCAAATCCAAAATTTCCAGCTCCACC
ACCAACCGACAGTATCCACCGCTGCGCCGCCGTCCTCCTCCGCCAACGACGGCGCCACCA
TCGAAGTCATCCGCCGTCCACGTGGCCGTCCACCCGGCTCGAAAAACAAATCCAAACCCA
AACCCAAACCCGAACCCAATTTTTTCACAGCAGCACGTGATGATCACGTGGAAAGACCCA
CTATGAGTCCTTACATCCTTGAAATTCCAATCGGAATTGATATTATCGATTCGATCTATC
GATTTTGCGGGAACCAAAATATGGGTCTATGTATTCTAAACGGGTCGGGTACTGTTACTA
ATGTTACACTTAAACAGCCTCCAATTAACCCGGCTGATTCTACAATTACCTTCCATGGAA
GCTTCAATATTCTTTCGATTTCAGCTACAATTATACCAAGTGAATTTTCTCGGGTCGCGA
ATGGATTCAGTATTTCATTAGCCGGGCCACAAGGTCAGGTTGTTGGTGGGCCGGTAATTG
GGCCACTTTTAGCTGCTGGGCCGGTATATTTAATTGCTACTACATTTAATAATCCTTTTT
ATTACAAGTTTCCAGCGGAGGACGACGGCGACGGCGGTCAGTCGCCAGTTTCCGGCGCCG
GAGATAGTGGGCAGCCACCGGAATCAACTCAGCATGAGTATTGTTATAGTTCTAATCAGT
TGCCATCGGATGTGATATGGGCACCTACCGCTAGACAATTACCACCTTACTAAAATCGTA
TTCAGAATGTGAAGTTTACAAATTTAGATTTAAAATTTATCTCGTGTTTTGGTGAGTTTA
GAATATATTTTATGTTTATTTAGGAAAAATATATTGAGTTTGAATCAAAGTTACGTTTAG
TATTGTGAAAAAAGAAATTGAAATATTAGTTGTCTCCGTTTGATTAAT
