Microarray Probes on PGSC0003DMT400005177
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_47635_PI426222305 |
JHI_St_60k_v1 |
CACAAGTAATTCCATTCTGTCATCTAGTTTTGAGGAATTAATTACGGAAATCTACCCAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400005177
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400005177 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G23180.1 |
+1 |
1e-162 |
485 |
278/600 (46%) |
cysteine-rich RLK (RECEPTOR-like protein kinase) 10 | chr4:12138171-12140780 FORWARD LENGTH=669 |
Transcript Sequence (1845 bp)
>PGSC0003DMT400005177 1845 pgsc_dm_v3.4
ATGTCTAGTTTGAATATCCCAATATACCTTGTGCTTTTCTTGATCAGCCAAAGTATTAGC
ACAACATTAGCTCTTGATGACTATTATTACTGCCCAGACACAACTACTTATAACAATATA
ACAAACACCTCTTACAATTCCAACCTCAATTTGCTACTATCAAATCTTTCTTCTGCCTCT
AGAGAACATCTTTTTTACAATTTCTCCATCGATGGCACCGATAATTTCGAAACAATTTAC
GGTCTTTTCATGTGTCGAGGTGATATGTTAAGTGTAAATTGTCAAGATTTTGTAACAAGA
GCTGTTAAAGATATAATCTTGTTATGCCCCGGTAGCAAAACGGCTGTATTATGGTGGGAT
GATTGCATGCTACGTTACTCGAATCAATCAATATTCCCCGATCCAAACTATGGATCCACA
ATTAACAATCCATCTACACCTTTTGTTATATATAACACTATTCCAATTACCAATAATGAA
CATGAACAAAGAAGGTTCAAACAGATTCTAGGGAGAATTATGAATAACGTAACGGCACAG
GCTGCCAGTGATGATCGATCGGTAGACAAGAAAATTGCAATTAGGGAAGCTAAGTTCAGT
GCTAACACAACAATTTATGCCTTAGCTCAATGCATTCCTCATATGTCTTCTAAAGATTGC
CTAAATTGCTTTGAAAATGCCATCGAAGTTTTAAACAGGTGTTGTGATGGTTATAGAGGT
GCTAGAGTTCAATTTCCTAGTTGTTTTATGAGGCATGAAGTGTACCACTTCTACAATAAT
GCTAAGCCACCTGCTTTGTCCCATAATCAAGTTGATCTTAGTGAGATTTTAACTGCTGAA
TCATTGCAATATGACTTTAGTACAATTGAAGCTGCCACTAACTTCTTTTCTATGGAAAAC
AAAATTGGCGTTGGTGGATTTGGTGATGTGTATAAGGGGGAACTTGATAATGGACAAGAG
ATAGCTGTAAAGAGGCTATCAAGAAGGTCAAGTCAAGGTGTTGAAGAATTTAAGAATGAA
GTTGTACTTGTCGCTAAGCTTCAACATAGAAATTTAGTAAGACTCTTAGGTTTTTGCTTG
GAAGGAGAAGAAAAAATACTCATCTACGAGTTCGTGTCCAACAAAAGCCTCGACTATTTC
TTATTTGATACGAAGAAACAAGCAACGTTGGATTGGTCAGTACGTGACAAGATTATTAAA
GGAATAGTACGAGGATTAGTTTATCTCCATGAAGATTCTCGTCCTCGAATCATACATCGT
GATCTCAAAGCAAGTAATATTTTGTTAGACAAAGATATGAACCCTAAAATTTCAGATTTT
GGCATGGCTAGAATATTTGGAGTTGACCAAATTGAAGGAAGCACTAACATAATTGTTGGA
ACATACGGCTATATGTCCCCGGAGTATGCAATGCATGGTCAATTCTCAGTGAAATCAGAT
GTTTTTAGTTTTGGTGTGCTTCTTTTGGAGATAATAAGTGGAAAAAAAAGAAATAATAAA
GAAGATAAATTTGATGACCTTCTTATCCATGCATGGAGGTTGTGGAAAGATGGTAGAGCA
ATGGAAATTGTTGATCCAACTCTTATTGGTGACTCAAATTCAATGTCGAAAATCATGAGA
TGTATACATATTGGATTGTTATGTGTTCAAATTGATTTGGATGGAAGACCTACAACTACT
TTGATATCTCATATTCTCGATACTAATTCTGCTATTCTACCAGAGCCAAATCAACCAGCG
TCTTTTAAGGATTATTCTAGATTAAGAAATATCGATCAACTCACAAGTAATTCCATTCTG
TCATCTAGTTTTGAGGAATTAATTACGGAAATCTACCCAAGATAG
