Microarray Probes on PGSC0003DMT400005075
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_47268_PI426222305 |
JHI_St_60k_v1 |
TTCGCTCTCATCTCCTTTGGTCGAGATCAGTAATACATGATTTAGAATTTAAACGTTATG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400005075
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400005075 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G35910.1 |
+2 |
2e-34 |
125 |
66/144 (46%) |
RING/U-box superfamily protein | chr2:15073225-15073878 REVERSE LENGTH=217 |
Transcript Sequence (726 bp)
>PGSC0003DMT400005075 726 pgsc_dm_v3.4
CCAAAATTCAAAAACTCCATCTTTTCTCCACAATTTCTTTTTATGCAAATATCTACTTTT
CTTATCAAGGACAATAATGGAAGGTGGTAAAGTGAGTGAAGGTTTAAAAGATCAATTAGG
TGATGAAGACAAATTTAACTACTATGGCTATGGTTTTGTATTTTCTTTTGGAATCATGGT
AATCCTTATAGTCCTCACTTATACTTCTTACTTATGTATTCGATTTCGATCGCGCAATAA
TCCAACCATCTCTACCATCACAACAACTACTACAAGAGTCAGAAATGGATTGATTTTTAT
TCAAGAAGGTCTTGATGAAGCAACTTTGAGGAGTTATCCAAAGTTATTATATTCACAAGT
TAAGTCTCACAAAGGGGATTTTGCATCTTCTTGTTGTGGATGTTCAATTTGTTTGGGTGA
TTATAAAGACAATGATATGCTTAGGCTATTGCCTCATTGTGGTCATCTTTTTCATCTCAT
GTGTATTGACACTTGGCTTAGGTTACACCCCACTTGCCCTATTTGTAGAAGTTCTTCGCT
CTCATCTCCTTTGGTCGAGATCAGTAATACATGATTTAGAATTTAAACGTTATGAACTCT
GAATAGTTAAGAGACTAAATTTTGTTTACATCTTTTCTGTATATATAGAATTTGAATTGA
ACATTCAAGAAGATATATAGAAGATTTTCCTTATTTTTATGTTCATTTTGTTAATTTTTA
TGGCGA
