Microarray Probes on PGSC0003DMT400004645
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_35582_PI426222305 |
JHI_St_60k_v1 |
CAGGAACAAAGTTTTGTTACCTGGTGCGATCATTAGAATTCGATGCACTTCTCCCAGCAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400004645
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400004645 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G47040.1 |
+3 |
0.0 |
1377 |
736/889 (83%) |
lon protease 2 | chr5:19093356-19098678 REVERSE LENGTH=888 |
Transcript Sequence (3048 bp)
>PGSC0003DMT400004645 3048 pgsc_dm_v3.4
ATTTTTCCCTATATAAATATCGATTTCTCAAAGCAATATACAGGAAGAAAAAACGAGTTT
TTTCGGGGAAGATAACTATGGCGGAATCTGTGGAACTTCCGAGCCGTTTAGCGATTCTTC
CATTCAGGAACAAAGTTTTGTTACCTGGTGCGATCATTAGAATTCGATGCACTTCTCCCA
GCAGTGTAAAATTGGTGGAGCAGGAGTTATGGCAGAGGGAAGAGAAGGGACTGATTGGAA
TATTACCGGTTAGAGATTCAGCTGAGAGTGCCACTTCGGGTACTGCAGTATCTTCAGGCA
TGGGTGGAGAGACATCAGATAGCCACAAGCTTGATTCAAAAAATCAACAGGAAGTTATAC
ACTGGCATGATAGGGGAGTTGCAGCCCGTGCTTTACATCTCTCAAGAGGAGTTGAGAAAC
CAAGTGGCAGAGTTACATACATCGTTGTACTAGAGGGGTTATGCAGATTCAATGTGCAGG
AACTTAGTACCAGAGGAACATATTATACAGCACGGATCACTTCTCTTGATATGACCAAGG
GTGAGCTGGAGTTAATTGAGCAAGACCAAGAATTCGTGGCATTGTCTCGTCAATTTAAAG
CCACTGCGATGGAGCTCATTTCCATCCTTGAGCAGAAACAAAAGACTGGTGGGAGAACAA
AGGTTCTTCTAGAGACAGTTCCTGTCCATAAATTGGCTGATATTTTTGTAGCTAGTTTTG
AGATTAGCTTTGAGGAACAATTATCCATGCTGGACTCTGTTGATGTTAAAGTAAGGCTTT
CAAAAGCTACTGAGCTAGTTGATAGGCATCTACAGTCAATTCGGGTGGCAGAGAAGATTA
CCCAAAAGGTTGAGGGGCAGTTATCAAAGTCTCAGAAAGAATTTCTGTTGCGACAGCAGA
TGAAGGCCATAAAAGAGGAACTCGGTGACAATGATGATGAAGAAGATGATTTGGTTGCCT
TGGAAAGGAAGATGCAAGGAGCAGGAATGCCTGCAAGTATCTGGAAACATGCTCTGAGGG
AACTAAGGAGACTCAAAAAAATGCAGCCTCAGCAACCTGGATACAATAGCTCCCGTGTTT
ATCTGGAGCTACTTGCTGATCTTCCGTGGGAGAAGGCCAGCCCAGAACTTGAATTGGACT
TAAAAGCTGCAAAAGAGCGTCTTGATGCTGACCATTATGGTTTATTGAAGGTCAAGCAGC
GGATAATCGAATATCTAGCTGTTCGGAAGCTCAAACCAGATGCGAGAGGTCCTGTGTTGT
GCTTTGTGGGTCCACCAGGTGTTGGGAAGACATCTTTGGCTTCATCTATTGCTGCTGCTT
TGGGCAGAAAGTTTATACGCATCTCCCTTGGTGGTGTCAAAGATGAGGCCGATATCAGAG
GGCATAGGAGAACATATATTGGAAGCATGCCTGGGCGTCTAGTTGATGGGTTGAAGAGAG
TAGGTGTTCACAATCCAGTTATGCTGCTGGATGAGATTGACAAGACTGGGTCTGATGTGA
GGGGAGATCCTGCATCAGCATTACTGGAGGTTCTTGATCCCGAACAGAACAAAACGTTCA
ATGATCACTACTTGAATGTGCCGTTTGACCTATCAAAGGTTATTTTTGTGGCAACTGCAA
ACAGGATGCAGCCAATTCCTCCCCCACTCCTGGACAGAATGGAGGTCATTGAGTTGCCTG
GATATACACCAGAAGAAAAGCTTAAGATAGCAATTAAGCATTTAATTCCTCGAGTTCTTG
ATCAGCATGGTTTAAGTTCTGACTTCCTTCAGATACCCGAGGATATGGTGAAACTTGTAA
TCCAAAGGTACACAAGGGAAGCAGGTGTACGTAATCTAGAAAGGAATTTAGCTGCCTTAG
CACGTGCAGCGGCTGTCAAAGTTGCAGAACAAGAACATCTAGTGCCTTTCGCCAAAGATG
TGCAACGACTTTCTTCACCACTGTTGGATGACAAACTTGCCGAGAGCGCCGAGGTTGAAA
TGGAAGTTATCCCTATGGGTGTCAATAATCATGATATCTCCGGTGCGTTTAGGGTTGCCT
CACCTATGGTGGTTGATGAACCAATGGTGGAAAAGGTGCTTGGTCCACCTAGGTATGATG
ATAGAGAAACCGCAGAACGAGTTGCTAATCCTGGAGTATCTGTTGGACTGGTGTGGACGG
CATTTGGTGGCGAGGTTCAGTTTGTTGAAGCCACAGCAATGGTGGGAAAAGGTGATCTTC
ATCTCACTGGCCAACTTGGGGATGTTATCAAAGAATCTGCTCAGATTGCATTGACATGGG
TTCGTGCCAGAGCCACAGAACTGAAGCTAGCTATTTCTGAAGAAACTAATCTTCTAGAGG
GACGAGATATTCACATTCATTTCCCCGCCGGAGCTGTACCTAAGGACGGACCCTCAGCTG
GTGTAACCCTGGTGACATCACTGGTTTCATTGTTCAGTAAAAAAAGAGTAAGAGCAGACA
CAGCAATGACCGGAGAGATGACTCTCCGAGGTATGGTCTTGCCTGTTGGTGGTGTCAAGG
ATAAGGTTTTGGCTGCCCATAGATATGGTATTAAAAGAGTTATACTGCCAGAGAGGAACT
TGAAGGACCTGGTTGAAGTCCCAGCAACTGTGCTTTCAAGTCTTGAGATAATACTTGCTA
AACGAGTGGAAGATGTGCTGGACCAAGCATTTGAAGGTGGCTGCCCATGGAGACAGCAAT
CAAAATTATGAAAAACTTAACAGACTTCCCTTAGCTAACAGTGAGAAACTCTGCCAACAA
AAAACAGTTTGGGCATGTAGATCGGAGGCCAGAGCTCATCATACCTTAAAGGAAATGTTA
ACACGATTAACGCATAACAGATATTCAAGAACATACTTAACAGATGTCTCTGAAAATGTT
CTCCATGTATTATTCTTGCCTCCTAATCAGCTGTATGTATCTATAAATGATTATTCTTTC
TTTTGAATATATTTGTTACAATTGTGGTCTGTATAAGCTTTCACTTAAAACAACAAGGTC
AGACACGTTGCTGCTTGCTTTTCCAAGCATTCATATATATAATTTGCA
