Microarray Probes on PGSC0003DMT400004307
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_28051_PI426222305 |
JHI_St_60k_v1 |
TAGCCGCGTCTCTGTACGTATTAGGTAAGGAAATGAAGAATTATACGTATTGCTCAAAGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400004307
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400004307 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G14320.1 |
+3 |
5e-14 |
69 |
26/46 (57%) |
Zinc finger, C3HC4 type (RING finger) family protein | chr3:4777731-4778345 REVERSE LENGTH=204 |
Transcript Sequence (764 bp)
>PGSC0003DMT400004307 764 pgsc_dm_v3.4
AATAATTAATCCAAAACTTAGACTTGCATTTATTTGCGTGTAACTTTGTATTGTCGGCAA
TAAGGCGTTCTCATCAAATCATAGTAGATAGAGAGAGAAACATGTATTTTCATTTTGAGC
CATTAGCCACCTTTACAGCTACCGCCACCGCTATTTTCTTAATTTCCACTATCAAATTCC
GTTGGTTCCGTCCCGACAATTATTTGCCGCCGCCGTTCAACGTCCTCGTCGAGGAAATCG
GTTACTGTTACTGTGCCGTGTGCCTCGACGAGGTGAGCGGTGGCGACACGTGTCGACAAC
TGCCCAAGTGCGGCCACGCATTCCACGCGATGTGCGTGGACGCGTGGCTAGAGTGCAATT
GGACGTGCCCAATCTGCAGAAGGCAAGTTACTGATGAACTTCCGAAGAGACAAGGTCAAA
ACACCCTAATTTCTTTTGTTATTTCACGCTGTGAAGAATTTGTGGCTAAGATTAATACTC
GTGCTGAAGAATTCATGATCGTTTTGTTCGAGACCGCTGTTTTAGGCCATCTTTGAATTT
TATTAAGTGTGTATTCATTGATCCGACTAATTCAGATTTGGTTTAATTTTTTTAACCTTT
TGCACAAGTTAACGAGAATGTTTAGTTTAGGCATATTTGTCCTTTTTTTTCCCTTTCTTA
AAGGAACTTTTTGATCGGAATATATGTATAATTGTTAGGTTTAGCCGCGTCTCTGTACGT
ATTAGGTAAGGAAATGAAGAATTATACGTATTGCTCAAAGAAGA
