Microarray Probes on PGSC0003DMT400004170
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_36836_PI426222305 |
JHI_St_60k_v1 |
CCAACAAAGTGAACTTAGTTCAAGTGGCAACTAATGGAGCTATGAAGATTACCTAATTAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400004170
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400004170 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G75590.1 |
+1 |
3e-43 |
147 |
83/153 (54%) |
SAUR-like auxin-responsive protein family | chr1:28383250-28383714 REVERSE LENGTH=154 |
Transcript Sequence (871 bp)
>PGSC0003DMT400004170 871 pgsc_dm_v3.4
CAAACAATAAAACTCTCTTTTTACTCAACTCCATTCTTCTACACATTAATTAGTTGTATT
TGATTATTGGAGATGTCGCCTGAGATCGGAAAATTCAACAGGATTCGTTGCATTGTAAGG
ATCAGTCAGATGCTCCGGCAATGGAAGAAAAGAGCTATATCTTCTTCATCTAAACGCATA
GCTTCTGATATACCTGCCGGACACGTAGCGATCTCGGTAGGCAGTAATTGCCGGAGATTC
GTGGTGCGAGCAAAGTATTTGAATCATCCGATTTTCAGGAAGCTATTAACTCAGGCGGAG
GAAGAGTATGGTTTCTCTAACCATGGAACTTTGGCTATACCTTGCGATGAGTTTTTATTC
GAGGAGATCCTTAGGTTCGTCTCTCGATCTGGATCCAGTAATTGGAATTGTTCGTTAAAT
ATCGATGATTTTCAGAAATCATGCCATGCAAGGTACAGGAATAGTATGGAGAATTTTGGT
GAATCTCGAGCGTTACTGGGTGGATCTACTGAAAAATCAGTGTGTTGAAAAAATTTGAGT
TTTAGGAGTAGAAAATTTGTGATGTTGCAGATGGAGATGGCGAAAAAATAATTGAGTCAT
CCCGAAATGTTTTGCTGACAGACTCCAGATAATTATAAAGAGTGTCTGTTACGTTTCAAA
TACAAAAGTAGGGAATCGAACTGATCACCAACAAAGTGAACTTAGTTCAAGTGGCAACTA
ATGGAGCTATGAAGATTACCTAATTATTATGTTATTCTTTTCTGAAATTTACGTTATACG
TATTTTTTTTTTCTTTGTTCAAGAAAAAGTTGTAAAATTTAATACTAAATTACGTAATTG
ATATATTACTCTTGAAGATTTTCATTTTGTA
