Microarray Probes on PGSC0003DMT400004159
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_36734_PI426222305 |
JHI_St_60k_v1 |
GAGGATGTTGCCTCTGACTAGGTAGATTAGTGAACTTATATTTACAAAGCCTCATTGTTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400004159
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400004159 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G18030.1 |
+1 |
2e-31 |
114 |
53/72 (74%) |
SAUR-like auxin-responsive protein family | chr5:5968527-5968793 FORWARD LENGTH=88 |
Transcript Sequence (770 bp)
>PGSC0003DMT400004159 770 pgsc_dm_v3.4
GGGGCCTTATGCTTTTAGACATAGTTTCAAAGTCTAAATAGTTTGATAATTAGTTGGAAG
GCATATTCATGTGTTATATTCATGTGCTATTGTCTCTAAATAGTGCGCGCCAAAATTCAA
CTACACAAGTAATCTTTAACTGGTGCCTATTGAAAATGCCAATTCAATGCACTTCACTAG
GATTCCACAACTTGTCATAGGCCTATATAAACAAAAAAAGAAAAGCCACAACACTCATCA
AAACTTAAAACTATCCAAAGCTTCATTATTTGCTTATCTACATTGAACTAAACAACCATG
GCTATCCGTATGCCTCGTATACTCAAGAAGTCTTCTACAGCTAAAGATGTTCCAAAAGGC
CACTGTGCTGTGTATGTTGGGGAGGAGCAGAAGAAGAGATTTGTAATTCCTATATCATTC
TTGAGCCACCCTTTATTTCAAAACTTGCTTAGTCAAGCTGAGGAAGAATTTGGTTTCGAT
CATCCAATGGGTGGTCTTACAATACCTTGCAGAGAGGATGTCTTCATTAACGTTACTTCT
CGTTTGAGGAACTGAAATGGAAACTTGCTTTCACAATTTTATACTAAAGCAAGATTCGGA
CACTGTAAAGTTTAGGAGTATTTAGAGAAAACAGTAATTAATATTAGAATGAGGATGTTG
CCTCTGACTAGGTAGATTAGTGAACTTATATTTACAAAGCCTCATTGTTAAATTATGGGA
AGATAATGAAGTATTGAACCTTCTTCAATTGATGGTTTCATTCATTTAGC
