Microarray Probes on PGSC0003DMT400004132
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_36717_PI426222305 |
JHI_St_60k_v1 |
GGTGGCTGCTTTAATTGTGTTGTTACTAATATTGTTGCAGTATCAGTCTACTTTTCTTGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400004132
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400004132 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G21180.1 |
+2 |
3e-22 |
89 |
68/123 (55%) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19875.1); Has 124 Blast hits to 124 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:9074956-9075351 REVERSE LENGTH=131 |
Transcript Sequence (575 bp)
>PGSC0003DMT400004132 575 pgsc_dm_v3.4
TCCAAATTCTAATTTTCAAGTAGAAAAAATAAACTTCATATTATACCCTTTTTAATATAT
ATATTTTTTCATGTATCCACATAGAAAAAATACAGCCTCCTCAATCTTGGAGTTTTTTTC
ACTAAATCCTTTACCATATCCAGTTTTATTATTTTTAGCTGTTATTTTTATATTTCTAGG
TATTCAATGGTTTGTTTCCTATGAAGAAGTGATGGAAGCTACTGAAGAAAGTTTTGGTTG
GATACTTATGATTGTGCCACTTGTCTTGTTATTCGCCGTCAAGTGGTTATCCACGGTGGA
CCCACCAGATTGGTTTTTTGGCGGGTCACCGTGGGACCGACGGCGAAGAACGTATCAAAT
GCCGTCGGAAGGAAGCTCACCGTGGGGGGTGGCTGCTTTAATTGTGTTGTTACTAATATT
GTTGCAGTATCAGTCTACTTTTCTTGATATGTGGTTTTTATAATTATAGAGGAATTAATT
AAGTGTGTAAATTATGTAACTATTGTTTGTAATTTATCGAATTATTATTTTCGTTTGGAT
AAGATCAAGATTTTCAGTAAAGTGATTTTCATATA
