Microarray Probes on PGSC0003DMT400003908
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_5377_PI426222305 |
JHI_St_60k_v1 |
CAAGAAGGCCATGAAGATGGGTCTTTCTCTCTTCTGCAGAACCTTCAATTCTTCTAAATG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400003908
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400003908 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G35730.1 |
+3 |
1e-110 |
343 |
177/247 (72%) |
Regulator of Vps4 activity in the MVB pathway protein | chr4:16931111-16933241 FORWARD LENGTH=466 |
Transcript Sequence (1774 bp)
>PGSC0003DMT400003908 1774 pgsc_dm_v3.4
CTCTTCTTCACTACCATTCTCACACACACTCTTCTCATTGCTTCACTCTCTCTTTCTCTT
TTAAGAAGAAAATGACAGTAGCAAACGCTGCCACCAAGCACTGCAAGAAGGCCATGAAGA
TGGGTCTTTCTCTCTTCTGCAGAACCTTCAATTCTTCTAAATGCAAGACAATGGCAAAGA
TGACGGTGGCGAGAATAAAATTGCTGAGAAACAAGAGGGAGGTGGTTGTGAGGCAAATGA
GGAGAGACATTGCTATGCTTCTTGAATCCCGTCAGGATGCCACTGCTCGTATTCGGGTCG
AACATGTAATAAGGGAACAAAATATATTGCAAGCAAATGAGATCCTCGAGCTCTTCTGTG
AACTAATTGTGGCTAGACTAACAATTATTGCAAAGCAAAAGCAATGTCCAGCTGATTTGA
AAGAGGGGATATCAAGTTTGATTTTTGCTGCCCCAAGGTGCTCAGATATTCCAGAATTGA
TGGGAATTAAAGACGTTTTTGAGAAGAAATATGGAAAAGATTTTGTTTCAGCAGCGACTG
ACCTGCGACCCAACGCTGGTGTAAACCGGACGCTCATTGAAAAGCTCTCTGTGAAAACTC
CAAGTGGTGAAGTCAAACTAAAAATCATGAAAGAAATAGCCAAGGAATACCAGGTTGAAT
GGGACACCGTAGATTCAGAGATGGAGCTTCTCAAGCCACCAGAAGAGCGTATAGAAGGAC
CAAATGGCTTTGTAAGTGCCACTAGCTTACCCCTGAAGCCGACCTCAAAGCAACCTGCTG
AGCCTAACAACCTCCCAAGGGCTTCAGATGACGGAGAATTGAAAGTTGCCAAATTTGATG
ACCCAGCTTCAGCTGCTAAAGCAGCTGCTGAATCTGCCAAGCAAGCAATTGCTGCAGCCG
AAGCAGCTGCATATCTTGCCAGTAAAGATGCAAAAGCATCTTCTGCTGGTTGTCACAACT
CTAGGAACAATGCAACTGTTGACAATATCCCTTTCATTTCTGGTGCTCAGGCTCCCAAGT
TCTCGCAAAATGAAGTGGCACCACCTTCTCAGTCCATAGTTGATCTGTATGATATGCACT
GGAGTAGTAAGAACATCAGGAATTCTGAAAATTCGCATAGTTCTGCTGGTGAAGAGATGC
CATTAGATATGAAAAGATCACAGAAGTTTGATAGGAGACATAGCTATAATGTTCCATCCT
CAAATCGTAATGTTCAGTATGATGATTCAGATTGCGACGAGGAAATCGAGATGGAAGATC
CCCCAAGTGGGACATATAAACCCAGCCCACCAACTGATACTGATGGTGGGAAGTTCTACA
GAAGGCACAGCTACAATGTTCCATCAGCACATTCAGGTATCAAGTTTGATGAATCAGATG
GCGAAGAAGAGATGGAAACTCAAGAATTCACTAGAGGAACCAATCGAGCCCCTAACCGTC
CTGCACCTCATGTGCCTCGGGTTCATCCCAATTTACCTGACTACGACAAGCTTACTGCTC
GCTTCGAGTCTCTCAAGTCCCAGAAATCTCGTCGTACCTAGATATCCAGGGTTCATGGAG
TCAGATACATTTTGTGCCAGTCTAATATTATTGTATACAGTACAGAAACCAAATGATATG
TTAAAAATGGTGTAGCATCATTTCGTGGAGTTCAGACCCTTTGTGTCGAGTTTATAAATA
TTGGTGTAATAAATCTTGGATATCCATTTTGCAAGGTTGTCCATTTTGCGGATCTCTCTG
TCTCTTTGTTAGATATATTTCCTGTCTATTCTCG
