Microarray Probes on PGSC0003DMT400003893
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_5442_PI426222305 |
JHI_St_60k_v1 |
CCTGTATTGTATTGCATAAGCATATCCAAATATTTGTAGGATATGCTTGTGAAGTCCATG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400003893
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400003893 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G35690.1 |
+2 |
9e-44 |
157 |
106/296 (36%) |
Arabidopsis protein of unknown function (DUF241) | chr4:16921886-16922740 FORWARD LENGTH=284 |
Transcript Sequence (1327 bp)
>PGSC0003DMT400003893 1327 pgsc_dm_v3.4
TTAGTAAAAAAGTAGTATGAAAATCTGCCACAAAAGATGTTCATGTCAATTTAATAATGA
CGCTTTGCTGTTTCCACTTGACAAAACTATGACTCCTCCAATCAACACAACATTAAGAAG
CCACGTATATGCTGAGGCATCTTTCTTCATCACTCACAAGCAATAAGGTAACGCAAAGTG
GCAACTCAATTGAAGACAAGAAAGAGCAATGATTAAAGGTTTGTTTTCAGGAAGCACAAC
AAGGGACTGCCCATTCTCTTTTGGCACACACTACTCTGTTTCTTGTCGCTTTCTAATACA
ATTTTGGTATAAATAGGATTCAGTTTTGATCATCCCCAAACTCAAAAAGTAAAAGGAAAG
GAACAAAGAGAGCAAAAAGATGGCAACCTTTTCATCAAAATCCAATAAAAGATCCATCAG
TTTGCCAAGCAGATCACATCCAGCTACTCAGAATATTGAAGAGGAGCTAAACAAGCTTAA
AACTTGGGAATTCTCTGCTTCACCAACTGCAGAAGCTGTTTATAATGCTCTAGTTGGTTT
TGGGGAGGTACATAAGTGTATGGGTGATCTTTTAAACCTGCCCTCGACTCTTCAAGCCCT
TTCTCAGTGCCAAAATAAGAAATGGGTCGATGAAATCTTGGATAAATCTGTCAGATTTCT
TGATATTTGTGGCACAACAAGGGAGTTCGTGTCGCAATTTAAGGAAAATGTTAAAGATGT
TCAGTCTTCATTGAGGAGGAGAAAAGGAGATTTGAACATCAACAACTACACCACATTCAG
GAAGAAAATGAAGAAAGAAGCCAAAAGTTTGATTACAGCTTTGAAAAGAATGGACCATGA
GGAAGTAGTTGATGTAATGGAAATTGATGATCAACTTGTCTCAGCTGTTATTAGAGTCCT
AAGAGAAGTTGCCACAATTGGAATTTCAGTATTCCAAATGGTGTTGAATTTCTTATCAGC
TCCAATTTCTAAGCCAATTAGTAAATGGTCTTTGGTTTCAAGATTGGTGAACAAAGGAGA
TCAAGAGAATGTCAATGAGATAGAAAGTGTTGATGTTGCATTAAGCAGCCTTTCCAAGCC
TGGTGCTAATGAAATGGAGAAGATCCAATTTGTGCAGAGAAAATTGGAAACAGTGGAAGC
TCATTTTGAATTCATTGAGAATGGTCTTGACAACATATTTAGATGCTTGATTAGATCAAG
AAGCACACTACTAAATATTGTCTCTTGCCAATGAAAATACTATACTATTGTCCTGTATTG
TATTGCATAAGCATATCCAAATATTTGTAGGATATGCTTGTGAAGTCCATGTAAAGGAAC
AATTTTG
