Microarray Probes on PGSC0003DMT400003021
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_50304_PI426222305 |
JHI_St_60k_v1 |
GCGACAGCACTAGCCATGTAAATTATTATTCCAATTGCAACGATAATTTGTATAGCCAAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400003021
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400003021 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G06080.2 |
+3 |
4e-173 |
509 |
228/362 (63%) |
Plant protein of unknown function (DUF828) | chr3:1834959-1837524 REVERSE LENGTH=469 |
Transcript Sequence (2273 bp)
>PGSC0003DMT400003021 2273 pgsc_dm_v3.4
CATAAATGCCTGTTTATTGCAGTTCTTTTTATTTGTTGAATTGAATGTTTGTCTTTCTTT
GTGTTGAAGACCCCACACATCATCATTATCAACAGTTCCCCAAACTTCTCTTTCTTTCTC
AGCCCCACATTTTTGTGCTCAACTCAAAAAGTTTCTGTATGAACACAGATTATTTTTTTT
GTCAAGTTCCTCCCCTCCAATTATAGTGGTTGCACTAAACAACAAGTTTTTCTTTATTGA
TTTAAAAAGTTGAGATTTGGGGGTCATTTTCTTGAAATTTATGTTATTTTGCTTCCAAAG
ATTGAATTTTTCTGTACTGAAAAACAGAGATGAGTGGAAACCCATGTCCAAAATTCTTTA
ACTCAATGACCCATTTCAATTTTTTCAAGAAATTCAGGCGTTTGAAGCCTATTGAGCCAT
TGTTGACACTTTTTGGGTTCTTGTTTTTTGTTCTTGGCTTATACTTGTTTATCTTCTTGT
TGGATTATAGAATTGTGGATACTACTGGTTCTCACTTGCGTGGGCCTTCTTTTTTTGTTA
CCTGGTTTGGCCTTAATGACTCTTCTTTATTACTAAAAAATAGTACTAGTACTAGTAGAA
ATGATGAGAAAGTAGGGTTTCTTGAAAATGATTGTGATATATTTGATGGGAATTGGGTGT
GGGATGAGAGTTATCCACTTTATCAATCAGAAGATTGCATGTTCTTGGATGAAGGTTTTC
GTTGTTCTGAGAATGGTAGACCTGATAATTTCTATACCAAATGGCGTTGGCAGCCTAAAG
ATTGCAACTTGCCCAGATTTGATGCAAAACATATGCTAGAAAAGCTGAGGAACCAGCGTG
TTGTGTTTGTTGGTGATTCAATAGGGAGAAACCAGTGGGAGTCTCTTCTCTGCTTGTTGT
CTTCAGCAGTTTCTGATAACTGCTCTATATATGAAGTTAATGGTAGTCCAATCACAAAGC
ACACTGGTTCTTTAATTTTTAAGTTCAAGGATTACAACTGCACGGTTGAGTACTACCGAG
CTCCATTCCTAGTGCTGCAGAGTCGTCCGCCTTCTCGGGCTCCTGGAAATGTTAAGATGA
CCTTGAAGTTGGATCAGATGGATTGGAGCTCTGCTAAGTGGAAAGATGCAGATTTATTGA
TTTTCAACAGTGCTCACTGGTGGAATAATGAGAAAACCATTAGAGGGGGATGCTATTTCC
CAGAAGGCGGAAAGATCAACATGACGATGGATGTGGAGACGGCATTTCAGAAGTCAATTG
TAACATTGGTTGATTGGATAGGCCGTGAAGTGAACGTATCCAAGACTAAAATATTCTTTC
GTACTTATTCTCCTGTACACTTCAGAGGTGGAGATTGGAAGACTGGCGGTAGCTGTCACC
TGGAGACATTACCTGACTTATTATCACCCCAAGAGTCATTGAGGAACTCGTTTGAATATA
TGACGGTCATTCATGTCCTATCGCAGCTCTTTAACAAATCAAAGGCTAGGAATATGAGTT
TACTGAATGTGACAGGCATGACATCTAGAAGAAAAGATGGTCACTTATTTTTGTATTATT
TAGGCCCTAAGGTGGGACCAGTTTCTCCCCACAAGCAAGACTGCAGCCACTGGTGTCTCC
CTGGTGTCCCTGATTCATGGAACGAGCTTCTCTATGCAATCCTCCTCAAACAGAAGTTAG
CTCTCAAATTTACTTCTCAATCCTCGGAATGACAGCAGAGAGGTCAATTCAAGTGGTGCA
CCATCCCAGTACCCTTGCAGCGCTCGCGACCATTAGAAATTGTACTTTGGAGAGGAAACT
TGAGCCAGAACAATCAAAGTGTCCAATGCTCATTGTATCAAATGAATGTGCCATTCTTCG
AGATCAATTTGAAAGTAAAAGGACATCCTCACATTTAGTTGATGGGATCCTTCCTAGGTT
CCAGTTTCAGTTACATTTATCATAGAATTGTTTTCCTGAGTCCTTTGTAGTCTGTCAGCA
CTCAGGAGTAAAATTTAGGTCTTCAATTCACGAATATGTCAAGTGTAAAGAGCATCGTGA
ACAAGCAAGTTGAAGTCGGCTCTATGAAGGATGAGGAAAAATATTGCGACAGCACTAGCC
ATGTAAATTATTATTCCAATTGCAACGATAATTTGTATAGCCAATTACAATGTATTTAGT
TGTTGGTAATGCATCTTTATCTTATCAAATTCTCATGGAATCAGTCAAATTGCAGCAATC
AAATTATTACTCATGATAATGTTGTTGTCTAGTACATGTTGAATCTTTTTTTT
