Microarray Probes on PGSC0003DMT400002567
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_23353_PI426222305 |
JHI_St_60k_v1 |
TTAAGGTTTGTTTTGGTGTGTTCTGCTTTATCCATACATTTCTTCAAGAGAGTGTTAGAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400002567
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400002567 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G16010.1 |
+3 |
2e-101 |
304 |
153/272 (56%) |
3-oxo-5-alpha-steroid 4-dehydrogenase family protein | chr5:5227982-5229012 FORWARD LENGTH=268 |
Transcript Sequence (1090 bp)
>PGSC0003DMT400002567 1090 pgsc_dm_v3.4
AAAATTCTACTTTTTCAACTAGTCAAATACACCAAAATCCAACAAGAGTACAAATAGCAC
AAAATTAGTTAACTTTTTATTTTTCATTTTTTTTCTATAGACATACACACATACACAAAA
AAATTTACATTTTTCAAGAATTGGAAAAAATGGTGATGTCTACATTGTTGAAATTTCTAT
ATCCTCCACCACCATCTTTATTTATTACTACAATGTCTATTATAAGTGTTGTTTCATTAG
CAAATGCTGGACTTTCAGAAATTAAAGGAAAGCATATGCAATATTCCAAATTCTTTGGAA
CAATAAAAAATGAAAATGATGAGAAGAAGAAGAAGAAGGAAAAAAAGGCAAAAATTGAGA
GTAAATTAGGGATGCTTTTATTATATGGTCCTTCATTTCTTGGTGGTATTTCTTCATTTG
CAATTTTTCCAAATGGGGATTTAAGGTTTGTTTTGGTGTGTTCTGCTTTATCCATACATT
TCTTCAAGAGAGTGTTAGAGGTCCTATTTGTTCACAAATACAGTGGTTCAATGGATGTTG
AAGATGCAATTGCAATATCATTAAGTTATTTCCTCTCCACAATTACCATGATTTATTGTC
AACACCTTTCTCAAGATTTGCCAGAGCCATCCATTGATCTCAAGTATAGTGGATACATAA
TATTTTTGGTTGGTATAATTGGCAACTTTTACCATCATATTTTGCTCTCTAAATTGAGAA
CAAAAGGTGAAAAAGAGTACAAAATTCCTCAAGGTGGCCTATTTGATTTTGCAACATGCC
CACATTATCTCTTTGAGATTCTTATATTTGTAGGAGTTTCATGCACTTCTCAAACATCAT
ATGCAATTTCATTCACTTTGGGAACTATCTTTTACTTGATGGGAAGGAGCATTGCTACAA
GAAGATGGTACAAGTCAAAGTTTGATGATTTTCCAAAGGATATTAAGGCACTTATTCCTT
ACATATTTTAGGTTATAACTTGCAATAGGACCTTCAATTTTTGTTTGTGTGGTTATGTTG
AACAAGTATTTTAAGTTATGAGTTATTTATGTAGATCCTTTAAATTATGTTTAATCTTAA
TAAAAAAAAT
