Microarray Probes on PGSC0003DMT400001182
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_18742_PI426222305 |
JHI_St_60k_v1 |
GGTGCTGGACCAAAAATTGAGGAAGTGGATTAAGAGTTTTTGAAAGAAATGTTTTACTTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400001182
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400001182 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G02500.1 |
+3 |
0.0 |
1105 |
590/658 (90%) |
heat shock cognate protein 70-1 | chr5:554055-556334 REVERSE LENGTH=651 |
Transcript Sequence (2229 bp)
>PGSC0003DMT400001182 2229 pgsc_dm_v3.4
ATTTGCTTCATTACATTTCATCTCAAACTAAACATTTACATTTTCTTCTTACTCCCGTGT
GTGTCTGTATTTTCAATAAGAAAATAAGAATGGCAGGAAAAGGTGAAGGGCCAGCAATTG
GAATTGATTTGGGTACTACATATTCTTGTGTAGGTGTATGGCAACATGATCGTGTTGAAA
TTATAGCTAATGATCAAGGCAACAGAACCACACCCTCTTATGTTGCTTTTACTGATACCG
AACGGTTGATTGGTGATGCTGCGAAGAATCAAGTAGCTATGAACCCAGTTAATACTGTAT
TCGATGCTAAGCGTTTAATTGGAAGGAGATTTAGCGATCCTTCAGTGCAGAGCGATATGA
AATTATGGCCATTTAAGGTTATACCCGGGCCTGCTGACAAGCCAATGATTGTTGTTACAT
ACAAGGGTGAGGAGAAGCAATTTTCTGCTGAGGAAATCTCATCCATGGTCTTAACCAAAA
TGAAGGAGATTGCTGAGGCATACCTTGGGACAACAATCAAGAATGCGGTCGTCACAGTCC
CTGCTTACTTCAATGATTCGCAGCGTCAGGCAACTAAAGATGCTGGTGTCATATCTGGTC
TTAATGTGATGCGTATAATCAACGAACCAACAGCAGCTGCAATTGCCTATGGACTTGACA
AGAAGTCTACTAGTACTGGTGAGAAAAATGTGTTGATTTTCGATTTAGGTGGTGGTACTT
TTGATGTGTCTCTTCTCACTATTGAAGAGGGGATCTTTGAGGTTAAAGCTACTGCTGGTG
ATACTCACTTGGGAGGTGAGGATTTTGATAATAGAATGGTGAATCATTTTGTTCAAGAGT
TTAAGAGGAAGCATAAGAAGGATATTAGTGGGAATCCGAGAGCATTGAGGAGGTTAAGAA
CTGCTTGTGAAAGAGCAAAGAGGACTTTATCATCCACTGCCCAAACAACAATTGAAATCG
ATTCGTTGTATGAAGGAATCGATTTTTACACAACTATCACTAGGGCAAGATTTGAGGAGA
TGAACATGGATTTGTTCAGGAAGTGTATGGAGCCTGTGGAGAAGTGTTTGAGAGATGCTA
AGATGGATAAAAGCGGCGTTCATGATGTGGTTCTTGTTGGTGGATCAACTAGGATCCCGA
AAGTTCAACAATTACTTCAGGACTTTTTCAATGGGAAGGAGCTTTGTAAGAGTATCAACC
CCGATGAAGCAGTTGCTTATGGTGCTGCTGTGCAAGCTGCAATCTTGAGCGGTGAAGGCA
ATGAGAAGGTTCAAGATTTGTTGCTGTTGGATGTTACTCCTCTGTCACTCGGTTTAGAAA
CTGCTGGAGGTGTAATGACTGTGTTGATTCCAAGAAATACAACCATTCCAACCAAGAAAG
AGCAAGTTTTCTCTACATACTCAGACAACCAACCCGGTGTCCTGATCCAGGTATACGAAG
GAGAAAGAGCGAGGACCAAGGACAACAACCTGTTAGGCAAGTTTGAACTCTCTGGCATCC
CACCTGCACCAAGGGGTGTTCCTCAAATCAATGTCTGCTTCGACATTGATGCCAATGGAA
TCCTGAATGTCTCCGCGGAGGACAAAACAACAGGGCAGAAGAACAAGATAACTATCACCA
ACGACAAGGGTCGGCTCTCCAAGGAAGAGATTGAGAGAATGGTGCAAGAAGCTGAGAAGT
ACAAGTCTGAAGATGAAGAGCTCAAGAAAAAGGTGGAAGCTAAGAATGGATTGGAGAATT
ACGCTTACAACATGAGGAACACTATTAAAGATGACAAGGTTAGTTCCCAACTTCCAGGTG
CTGATAAGAAGAAGATTGAGGACGCGATCGATGAAACTATCAAGTGGTTAGACAGTAACC
AACTTGCAGAGGCTGATGAGTTTGAAGACAAGATGAAGGAACTGGAAAGCGTATGCAATC
CGATTATTGCCAAGATGTATCAAGGTGGTGCCGGTGGAGCTACTATGGATGAAGATGATG
GTCCTTCTGTTGGTGGTGGTGCAGGAAGTGGAAGTGGTGCTGGACCAAAAATTGAGGAAG
TGGATTAAGAGTTTTTGAAAGAAATGTTTTACTTGTTTGTTATTAAGTGTGCTTTCAATT
AGCCTTTTGAAATGAAAGTTTGTTCACTCTTTGTTGTTAATATGTACTTTTCAATGTAGA
ATTGAAGAGAACTTCTTCTGTTCTTACCCTAAAATTGTGATTCAGTGACTTAATATAGTC
TTCTTTTTT
