Microarray Probes on PGSC0003DMT400001181
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_18723_PI426222305 |
JHI_St_60k_v1 |
GGACCAAAGATTGAGGAAGTGGATTAGGAGTTTTTGAGTTGAATTGTTTTACTTGTTTGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400001181
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400001181 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G02500.1 |
+3 |
0.0 |
1107 |
592/658 (90%) |
heat shock cognate protein 70-1 | chr5:554055-556334 REVERSE LENGTH=651 |
Transcript Sequence (2172 bp)
>PGSC0003DMT400001181 2172 pgsc_dm_v3.4
ATTTGCTTCATTACATTTCATCTCAAACTAAACATTTACATTTTCTTCTTACTCCCGTGT
GTGTCTGTATTTTCAATAAGAAAATAAGAATGGCAGGAAAAGGTGAAGGGCCAGCAATTG
GAATTGATTTGGGTACTACATATTCTTGTGTAGGTGTATGGCAACATGATCGTGTTGAAA
TTATAGCTAATGATCAAGGCAACAGAACCACACCCTCTTATGTTGCTTTTACTGATACCG
AACGGTTGATTGGTGATGCTGCGAAGAATCAAGTAGCTATGAACCCAGTTAATACTGTAT
TCGATGCTAAGCGTTTAATTGGAAGGAGATTTAGTGATCCTTCAGTGCAAAGCGATATGA
AACTATGGCCTTTTAAGGTTATACCCGGGCCTGCTGACAAGCCAATGATTGTTGTTACAT
ACAAGGGTGAGGAGAAGCAATTTTCTGCTGAGGAAATCTCATCCATGGTCTTAACCAAAA
TGAAGGAGATTGCTGAGGCATACCTTGGGACAACAATCAAGAATGCGGTCGTCACAGTCC
CTGCTTACTTCAATGATTCTCAGCGTCAGGCAACTAAGGATGCTGGTGTCATATCTGGTC
TTAATGTGATGCGTATAATCAACGAACCAACAGCTGCTGCAATTGCCTATGGACTTGACA
AAAAGTCTACTAGTACTGGTGAGAAAAATGTGTTGATTTTCGATTTAGGTGGTGGTACTT
TTGATGTGTCTCTTCTCACTATTGAAGAGGGGATCTTTGAGGTTAAAGCTACTGCTGGTG
ATACTCACTTGGGAGGTGAGGATTTTGATAATAGAATGGTGAATCATTTCGTTCAAGAGT
TCAAGAGGAAGCATAAGAAGGATATTAGTGGGAATCCGAGAGCGTTGAGGAGGTTAAGGA
CTGCTTGTGAGAGAGCAAAGAGGACTTTATCATCCACTGCTCAAACTACAATTGAAATCG
ATTCCTTGTATGAAGGGATTGACTTTTACACAACCATCACAAGGGCAAGATTCGAGGAGA
AGAACATGGATTTGTTCAGGAAGTGTATGGAGCCTGTGGAGAAGTGTTTGAGAGATGCTA
AGATGGATAAAAGCGGCGTTCATGATGTGGTTCTTGTTGGTGGATCAACTAGGATCCCGA
AAGTTCAACAATTACTTCAGGACTTTTTCAATGGGAAGGAGCTTTGTAAGAGTATCAACC
CCGATGAAGCAGTTGCTTATGGTGCAGCTGTGCAAGCTGCAATTTTGAGCGGTGAAGGCA
ACGAGAAGGTTCAAGACTTGTTGCTGTTGGATGTCACTCCTCTGTCGCTCGGTTTAGAAA
CTGCTGGAGGTGTAATGACTGTGTTGATTCCAAGGAATACAACCATTCCAACCAAGAAAG
AGCAAGTTTTCTCTACATACTCAGACAACCAACCCGGTGTCCTGATCCAGGTATACGAAG
GAGAAAGAGCGAGGACCAAGGACAACAACCTGTTAGGCAAGTTTGAACTCTCTGGCATCC
CACCTGCACCAAGGGGTGTTCCTCAAATCAATGTCTGCTTCGACATTGATGCCAATGGAA
TCCTGAATGTCTCCGCGGAGGACAAAACTACTGGACAGAAGAACAAGATAACTATCACCA
ACGACAAGGGTCGACTATCCAAGGAAGAAATTGAGAGAATGGTGCAAGAAGCTGAGAAGT
ACAAGTCTGAAGATGAAGAGCTCAAGAAAAAGGTGGAAGCTAAGAATGGATTGGAGAATT
ACGCTTACAACATGAGGAACACTATTAAAGATGACAAGGTTAGTTCCCAACTTCCAGCTG
CTGATAAGAAGAAGATTGAGGACGCGATCGATGAAGCTATCAAGTGGTTAGACAGTAACC
AACTTGCAGAAGCTGATGAGTTTGAAGACAAGATGAAGGAACTGGAAAGCGTATGCAATC
CGATTATTGCCAAGATGTATCAAGGTGGTGCCGGTGGAGCTACTATGGATGAAGATGATG
GTCCTTCTGTTGGTGGTGGTGCAGGAAGTGGAAGTGGTGCTGGACCAAAGATTGAGGAAG
TGGATTAGGAGTTTTTGAGTTGAATTGTTTTACTTGTTTGTTACTAAGTAATCTTTGAAT
AGCCTTTTGTAATGAAAGTTTGTTCATCCTTTTGTTGTTAATAAATTATGTGCTTTTCAA
TATAGAATTGAA
