Microarray Probes on PGSC0003DMT400001016
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_26508_PI426222305 |
JHI_St_60k_v1 |
CCAGAAGGCTCACTAATATTATGCCTGGAGGAAAGAAAGTAATTTGCTTATTCATTTTGC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400001016
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400001016 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G29010.1 |
+2 |
1e-66 |
225 |
127/178 (71%) |
Enoyl-CoA hydratase/isomerase family | chr4:14297312-14302016 REVERSE LENGTH=721 |
Transcript Sequence (1035 bp)
>PGSC0003DMT400001016 1035 pgsc_dm_v3.4
AAAGTAATTTGCTTATTCATTTTGCAGGCTTCAGGATTTAGCTGGATATGGAGTTGCTAT
TGCAACAGGGAAAGAGAATAGTTCGGCTTTTCCTGATAGAATATTTAAGTCTCCATTGCT
TGACCTTCTAATAAAAAGTGGTCGAAATGGTAAAAATAATGGAAAAGGATACTATATTTA
CAAGAAGGGAGAGAAGGCAAGACCTGATCCTTCAGTGCTTCCAATTATTGAGGAGTCCAG
AAGGCTCACTAATATTATGCCTGGAGGAAAGCCAATATCTATCACTGATCAAGAAATTGT
TGAGATGATACTCTTTCCTGTTGTGAACGAGGCATGTCGTGTTTTGGATGAGGGGGTTGT
AATCCGACCATCAGACCTTGATGTCGCTTCTGTACTTGGAATGAGTTTCCCATCTTACAG
AGGTGGCATTGTTTTCTGGGGAGATACTGTTGGGGCTGGTCATATATATAAAAGTCTCCG
CAAGTGGTCAGAATTATATGGTAATTTCTTCAAGCCATCAAAGTTCTTGGAAGAGAGAGC
AGCAAAGGGCATTCCCTTGAGCGCTCCTGCTGCTACGTCTTCAGCATCAAGGTCACGCAT
GTAGTAAGCAATACATTTACGACTTCAGATACTGTGGAATATAGAAAGGCACCTACTTTG
ACCTTTTCATCGTTATGGTTCATATGTTTTAATGGTACATGCATAATGTTACCTCCTCTG
GTCAGGGTGGGAACTGTTAGTAGTCTTAAACACCTCAGTTTCAAGTCCAAGCTTAGTGGT
ATTGGCTATGGACAAGGATGTTGCAGATTGCTTAATTTTTTGAATAATGTTGGAAAACAT
TTCAACTCTTATATGTTATTTCTTATTTCTAGAATAACCTAATAGACACCTCTACGAAGT
TTAAGCTATACCTGTGTTTGAAACTCCTGTTTTGACTCAGTTCAGGTGTCTAGGATATAT
ACCGACCTTACCCCTACCTTTGTAGGGTAGAGAGGTTGTTTTCGATAGACTATCAACAAA
TTGGGGCGATATTTC
